DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12766 and kcnab1

DIOPT Version :9

Sequence 1:NP_647839.1 Gene:CG12766 / 38462 FlyBaseID:FBgn0035476 Length:320 Species:Drosophila melanogaster
Sequence 2:XP_012818504.1 Gene:kcnab1 / 549740 XenbaseID:XB-GENE-950688 Length:429 Species:Xenopus tropicalis


Alignment Length:334 Identity:74/334 - (22%)
Similarity:129/334 - (38%) Gaps:89/334 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 GTHIQGIGLGTFASTEGD-----CERAVLHAIDVGYRHIDTAYFY-GNEAEV--GAAVRKKIAEG 70
            |..:..:||||:.:..|.     .|:.:..|.:.|....|||..| ..:||:  |..:|||    
 Frog   108 GLRVSCLGLGTWVTFGGQISDEVAEQLMTIAYENGVNLFDTAEVYAAGKAEIILGNIIRKK---- 168

  Fly    71 VIKREDIFITTKL-WCNFHEPER------VEYACRKTLKNIGLDYVDLYLIHWPFSYKYRGDNEL 128
            ..:|..:.||||| |....|.||      :....:.:|:.:.|:|||:...:.|           
 Frog   169 NWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKASLQRMQLEYVDVVFANRP----------- 222

  Fly   129 IPKDANGEVELVDIDYLDTWGAMEKLVDLGLTKSIGVSNFNEEQLTRLLANCK----IKPIHNQI 189
               |.|..:|       :...||..:::.|:....|.|.::..::....:..:    |.|:..|.
 Frog   223 ---DNNTPME-------EIVRAMSYVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQA 277

  Fly   190 EVHPALDQK---KLIALCKKNGILVTAFSPL------GRH--------NAELRTPTFMYD----- 232
            |.|....:|   :|..|..|.|:....:|||      |::        .|.|:...::.|     
 Frog   278 EYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYENGVPESTRASLKCYQWLKDKILSE 342

  Fly   233 -GKVQ--------AIADKYNKSIAQVVIRYVIE--------LGTIPLPKSSNPKRIEENFNVFDF 280
             |:.|        .||::...::.|:.:.:.:.        ||      ||||:::.||......
 Frog   343 EGRKQRTKLRDLMPIAERLGCTLPQLAVAWCLRNEGVSSVLLG------SSNPEQLIENLGAIQV 401

  Fly   281 KLDAEDHAI 289
            ......|.:
 Frog   402 LPKMTSHIV 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12766NP_647839.1 ARA1 5..298 CDD:223729 74/334 (22%)
Tas 12..299 CDD:223739 74/334 (22%)
kcnab1XP_012818504.1 Kv_beta 101..417 CDD:213602 74/334 (22%)
Aldo_ket_red 101..416 CDD:119408 74/334 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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