DRSC/TRiP Functional Genomics Resources

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Protein Alignment ntc and LOC3290240

DIOPT Version :10

Sequence 1:NP_647829.1 Gene:ntc / 38443 FlyBaseID:FBgn0035461 Length:314 Species:Drosophila melanogaster
Sequence 2:XP_565383.3 Gene:LOC3290240 / 3290240 VectorBaseID:AGAMI1_012851 Length:283 Species:Anopheles gambiae


Alignment Length:303 Identity:67/303 - (22%)
Similarity:126/303 - (41%) Gaps:58/303 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DTKSEIEGFIAIPTTSGEQQQQQPQQQQNEQQVVGTKDIKAPDQVGKKQRPRLIQEKSTQETNPL 67
            |:.:.....:.:..|:.|.|:.:...:...::..|.:.|........|..|.|:::.|.      
Mosquito     2 DSDASENNSVPLDKTNDELQRSRSPLETVAEEAEGYQPILVTPATEWKSLPLLVEDSSR------ 60

  Fly    68 ILEHATLEWVPQHMDKLLNQYQECRK----MPAAEWLHLLTYLVALECGFVEE------ETFAQK 122
            :|...:|:...:|.      :..|.:    :..::.:.:|.|::|||.|.:.:      .....|
Mosquito    61 VLLAPSLQLALRHF------FTHCGRDVIEISRSDLMIVLIYVIALETGLIPKGGSLPPSCRPGK 119

  Fly   123 RHLIQPVPSFSSFHAQNVRILSEQ-----------PARYEVCFNDTVYIMRLRTLLDKHAPEETS 176
            .|     .::.||..:.|...:.:           |.|:|:   :.|:              |::
Mosquito   120 HH-----TTYRSFDRRLVNHFASRLPLDWFGARAGPYRFEL---ELVH--------------ESA 162

  Fly   177 LVAALQCRLMAVSLGDQLMITLSPAPPSKEPGYSVSLSIGRYVLNIQAKNKPIYHRFRKLDELSY 241
            ..:.|.|.|:|:|.||.|::.|.|....| .|:||::.|..:|..:.....|:.  ::.|..||.
Mosquito   163 TCSNLSCTLVALSSGDLLIVNLLPFYGQK-AGFSVTVPISFHVPAVNGNRLPLC--YQNLSGLSV 224

  Fly   242 QLKQHLFQPMRSQQLMQMEMKLQPSLLGLPDELYFEIFRYLDK 284
            :||..||.|.|:....:....:.|||.|||.||...:..|||:
Mosquito   225 KLKNELFVPFRNHMYSKFVFTISPSLRGLPQELVARVMEYLDE 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ntcNP_647829.1 F-box-like 267..>298 CDD:463757 9/18 (50%)
LOC3290240XP_565383.3 None

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