Protein Alignment armi and Upf1

DIOPT Version :10

• Sequence 1: NP_647816.2
• Gene: armi / 38427
• FlyBaseID: FBgn0041164
• Length: 1188
• Species: Drosophila melanogaster
• Sequence 2: XP_322028.5
• Gene: Upf1 / 1282033
• VectorBaseID: AGAMI1_014598
• Length: 1161
• Species: Anopheles gambiae
• Alignment Length: 1028
• Identity: 236/1028 - (22%)
• Similarity: 371/1028 - (36%)
• Gaps: 312/1028 - (30%)

  Fly   262 ETYILKTDLPTGTDLHLGDIVLADLIECQYSKFTRRAIKITPLEKNFGATKLTQQSSMGSSGSGK 326
            |.|.:..| ..|||....|..:....:.|.|:          |:...|.:::        :|.|:
Mosquito    22 ENYFVGAD-SQGTDYDFRDFTIPSQSQTQASQ----------LDHLGGGSQV--------NGFGR 67

  Fly   327 AVTV-----TGVNRFITAELWQKESVSLKLTNNLNRTLRLESITVCNDSESQLSVVSPL------ 380
            .:.|     :|:...| .|| |.|....::....|:.|...:...|...|....|:..:
Mosquito    68 RIGVDPTKLSGITSAI-GEL-QFEEDEDEIDPAENKDLPPHACRYCGIHEPSTVVMCNICKKWFC 130

  Fly   381 ESKEISSGSEIT----------VTFEIHTQF-LGEAIEKYVLNFDLLKVRRVF----------TV 424
            ..:..:|||.|.          ||  :|... |||.    ||......||.||          :|
Mosquito   131 NGRGSTSGSHIVNHLVRAKHREVT--LHADGPLGET----VLECYSCAVRNVFVLGFIPAKSDSV 189

  Fly   425 IVCKTKEEVA------------EAEKRMIAAEALM-----APGRNSQERSRFYA-------NQVW 465
            :|...::..|            |..|.:||....:     .|....|.|:|..:       .::|
Mosquito   190 VVLLCRQPCAAQNSIKDMNWDQEQWKPLIADRCFLFWLVKIPTEQDQLRARKVSAAQINKLEELW 254

  Fly   466 CNKVDVIPGQQIVTKRRFVALRLGCFEVPKELRQICLTSERRQEMIKAIEQHYSFLTEPLSIKTY 530
            ...||                  ..|:   :|.:..:..|.:|..::.::.:           .|
Mosquito   255 KENVD------------------ATFQ---DLEKPGIDKEPQQVQLRYVDGY-----------QY 287

  Fly   531 MHRFRLLLHLEEIECFVNFRNYD----------------------RDRAHFL---RDGEFLTLQI 570
            .:.|..|:.||        .:||                      :..|:|.   .||:...:..
Mosquito   288 QNTFGPLVKLE--------ADYDEKLKESQTQENIEIRWDTGLNKKTIAYFTLAKNDGDMKLMHG 344

  Fly   571 ENLAER------RPSLVIGDTLRVINPWSDPDSQTTKSYEGIIHKVLFDRILLKFHSSFQEKYNG 629
            :.|..|      :|...||..::|.:.:.|......|..    |:...:|.
Mosquito   345 DELKLRYVGELHKPWSCIGHVIKVPDNYGDDVGLELKHN----HQAPIERT-------------- 391

  Fly   630 EDYRLEFYFSRYSFRKQHHAISK---------------IVGVM----GEDFLFPSKVTKR-ENPQ 674
            .::.::|.:...||.:...|:.|               ::|.:    .|:.||...:.|. ..|.
Mosquito   392 SNFSVDFIWKGTSFERMQQALRKFAMDAKSVSNYIYARLLGNVRADGAEEVLFRLNLPKHFSAPN 456

  Fly   675 LDVYMKDDDMYLYDSKLEWYNQSLNSIQKRAVFNILRGEAENIPYVLFGPPGSGKTMTLIETLLQ 739
            |                    ..||..|..||.:.|:....    ::.||||:|||:|....:.|
Mosquito   457 L--------------------PDLNRSQVYAVRHALQRPLS----LIQGPPGTGKTVTSATIVYQ 497

  Fly   740 LVRNLPGARILVGTPSNSSADLVTKRL-----------------IDSKALLQGDFIRLVSYNQVE 787
            |.| |....|||..|||::.|.:|:::                 |||..    .|:.|  :||:.
Mosquito   498 LAR-LNSGPILVCAPSNTAVDQLTEKIHRTNLKVVRVCARSREAIDSPV----SFLAL--HNQIR 555

  Fly   788 KDLIPPEIMSYCATSDVGAVGSCEDKMMVTESGLKLRCQAKFIGTHRITISTCTTLGNFLQLGFP 852
            ......|:.......|.....|..|:...  ..||.:.:.:.:....:...||...|:   |...
Mosquito   556 NMAQNSELKKLQQLKDETGELSLSDERRY--RSLKKQAERELLEAADVICCTCVGAGD---LRLQ 615

  Fly   853 AGHFTHVLFDEAGQCTEPETMVPIVMLTKKRSQVVLSGDPRQLQSIVTSRIASKMGFSISFLERL 917
            ...|..:|.||:.|.||||.|||:|:..|   |::|.||..||..:|..:.|:|.|.|.|..|||
Mosquito   616 RIKFNSILIDESMQSTEPECMVPVVLGAK---QLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 677

  Fly   918 --LERSPYRKDLQRFPESSGYNPLVLTKLLYNYRALPSIMSIYSRLFYDDELIPVLSEKDSRESR 980
              |...|:|.::|                   ||..|.:....|..||:..|...:. .|.|
Mosquito   678 VALGIRPFRLEVQ-------------------YRMHPELSQFPSNFFYEGSLQNGVC-ADER--- 719

  Fly   981 LLSKLRCVFE-SEKDIPQAHGTFFYGIIGENRQNNDSPSWFNPQEVREVFLMTIALYRANVTADQ 1044
               ||:..|. ...|.|.    ||....|:........|:.|..|...|..:|....:|.:..||
Mosquito   720 ---KLKVDFPWPSPDCPM----FFLVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLKAGIKPDQ 777

  Fly  1045 IGIITPYQKQ---------------VKMLRSMFIGTDVVMPKIGSVEEFQGQERDIILISTVRSS 1094
            |||||||:.|               .|:.:.:         :|.||:.|||:|:|||::|.||::
Mosquito   778 IGIITPYEGQRAYLVQYMQYQGSLHSKLYQEI---------EIASVDAFQGREKDIIIMSCVRAN 833

  Fly  1095 EEILRMDARFSLGFVRCSKRLNVAVSRARAMMIIFGNPHLLAVDECWRQLILF 1147
            |       ...:||:...:|||||::||:..:||.|||.:||..|.|..|:.|
Mosquito   834 E-------HQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVLAKQELWNHLLNF 879

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
armi	NP_647816.2	DEXXQc_Mov10L1	697..949	CDD:350836	76/270 (28%)
		DNA2	<829..1148	CDD:440729	105/337 (31%)
Upf1	XP_322028.5	None