DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kst and Dyb

DIOPT Version :10

Sequence 1:NP_001097492.2 Gene:kst / 38418 FlyBaseID:FBgn0004167 Length:4337 Species:Drosophila melanogaster
Sequence 2:NP_001097287.1 Gene:Dyb / 36362 FlyBaseID:FBgn0033739 Length:816 Species:Drosophila melanogaster


Alignment Length:858 Identity:179/858 - (20%)
Similarity:273/858 - (31%) Gaps:282/858 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  3421 AAKLGEIYPDAKEHIEVKRDETVEAWTDLKEKTAARKNKLSQAE-QLQSYFDEYRDLIAWINEML 3484
            |:||..|......|:       |:.|..::   |.|:|.|:..| |.:........|::.:...|
  Fly    29 ASKLRYIQKSTNLHL-------VDIWNVIE---AFRENGLNTLEPQSEVSVARLETLVSSLYHNL 83

  Fly  3485 AK--ITAPEL-ANSVAGA---ELLLASTKDHDTEIRTRDETFAKFAANGQQLIKEKHFLAHEVED 3543
            .|  .||.:: .:|.||.   .||.|.|.|:..:||......|.......:|:.:..::..::.|
  Fly    84 NKRLPTAQQVPVDSKAGLLLNWLLAAYTSDNSGKIRVFSIKVALATMCSGKLVDKLRYIFSQISD 148

  Fly  3544 KIKVLQA--RHELLKHTLNKRREIYEL-------NLDTQLFLKDAEI-LEQWISS--REPQLKDT 3596
            ....|.|  ..|.|:..|.....:||.       .|:.::|..:.:: :..::::  .||     
  Fly   149 GAGQLVAWKLGEFLREVLALPAAVYESPTFHYKEGLEEEIFPAENKVTVNDFMATLMSEP----- 208

  Fly  3597 KLGDS----IPQVEDLLRRHEDFEKTVAA--QEEKF-------QAIKRITMLEQLF-------RH 3641
              |.|    :|.|..|.........||.:  .:|.|       |......:.::.|       .|
  Fly   209 --GPSCLVWLPLVHRLATVETIVHPTVCSVCHKENFTGFRYRCQRCHAYQLCQECFWHGKTSLNH 271

  Fly  3642 QLEQE--------KISK-----LQEKERLEKERLEQLKQRELQRLADERRRAEKQHEHRQNAASQ 3693
            |.:.|        ..||     |::..|...|:..|:    |.|..|:                .
  Fly   272 QNDHEVKEYSSYKSPSKQIGHSLRKSFRCVPEKTVQV----LPRFPDQ----------------P 316

  Fly  3694 EKTPIFS---SPMVTPAQTSGPQSPALSQVQLRPPFGDDNEHLALQKS-------------SSSG 3742
            |||...|   .|...|:.........|......|..|...:|....:|             |:||
  Fly   317 EKTLNLSHIVPPSPLPSHNGFSDPSGLVHGHHGPHPGLPGQHGLFDRSSTLDSRATGRSLDSASG 381

  Fly  3743 MFGDRLRR-GSADAN------VKRAESMKVQPKQA------KRTPSFTTRRRAQS------FRKN 3788
            ..|..:.| .:|.||      :.|..:...|..:|      ..||..|...|||.      ..||
  Fly   382 TAGTTMSRVAAASANDEEHRLIARYAARLAQENRAPSNLPDNATPIGTDNSRAQRELIAQLESKN 446

  Fly  3789 QKGEGFDLPPVEIQGSLERKHGLQSGGKKAPVRSWKQFHTVLCGQLVCFFKDENDFLQQKTATAP 3853
            :          ||...:.|....|...:.||                     ||..|        
  Fly   447 K----------EIMREIARLRRQQETEQMAP---------------------ENPAL-------- 472

  Fly  3854 VNILGAKCERADDYTKKKYVFRLKLPDGSEFLFEAPSLDILNDWVRKISFHASLPPNMQLLSYDE 3918
            :|.|.|..:|..:.            :|        .|..|.|..|::.        .||.....
  Fly   473 INELRALRQRKGEL------------EG--------HLGALQDSRRQLM--------EQLEGLMR 509

  Fly  3919 SMKQQSSSSPDIKVTSSVESPVSSRNSSPDSQR---RTSGAQVLDGTATPQMAFLQRQMQQ---- 3976
            .:|.|.::||.           |:.||||.|.:   ...||.:| || :|..|...:||||    
  Fly   510 MLKNQQTASPR-----------STPNSSPRSGKSPPMPGGAGIL-GT-SPMSALHAQQMQQHPMA 561

  Fly  3977 -----------QQQQQQSQPSSPTGGFDQKPPIPPRGAAPVASHRQSQENLVVMRNRQSSNDLQQ 4030
                       ||||||:                 .|..|.:..:..|.|       |.|:|::.
  Fly   562 GGVRASQQQLLQQQQQQA-----------------HGHGPFSQSQLEQLN-------QISSDMRS 602

  Fly  4031 SATLPAGLTGVQQNGNGKDDNALLTRNSEARQSDNPPPLPTTMPPVGGQHQHPQNSHSHQNQH-- 4093
            :..           .||               |..|||:.||............|..|:||.:  
  Fly   603 AFA-----------ANG---------------SATPPPMRTTTATANVSAIPSLNPISNQNPNLN 641

  Fly  4094 -QAQVQQRINAFNAAASQQHQPDYFNNNTARQQ---PQRIPSGRIDSTRKFIEMEAHNNNGGTSS 4154
             .|::.:..:...:|.|  |.....|....|.|   ||  |:..|...|..:.:|..:..||.|.
  Fly   642 PDAELNEAADHLTSAIS--HMVSDLNAGRGRAQQLGPQ--PASSIPQARFIMPLEFRHIEGGESE 702

  Fly  4155 SPKRSTINYSSSG 4167
            ...:...|....|
  Fly   703 DSSQCECNDCECG 715

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kstNP_001097492.2 CH_beta_spectrin_rpt1 61..176 CDD:409042
CH_beta_spectrin_rpt2 196..302 CDD:409043
SPEC 450..640 CDD:238103
SPEC 658..832 CDD:238103
SH3 885..935 CDD:214620
SPEC 1030..1236 CDD:238103
SPEC 1134..1341 CDD:238103
SPEC 1343..1551 CDD:238103
SPEC 1449..1658 CDD:238103
SPEC 1555..1764 CDD:238103
SPEC 1765..1975 CDD:238103
SPEC 1873..2080 CDD:238103
SPEC 1979..2185 CDD:238103
SPEC 2188..2402 CDD:238103
SPEC 2407..2618 CDD:238103
SPEC 2514..2725 CDD:238103
SPEC 2726..2934 CDD:238103
SPEC 2935..3145 CDD:238103
SPEC 3042..3251 CDD:238103
SPEC 3149..3357 CDD:238103
SPEC 3359..3567 CDD:238103 36/154 (23%)
SPEC 3465..3680 CDD:238103 53/265 (20%)
PH_beta_spectrin 3801..3904 CDD:269975 17/102 (17%)
DybNP_001097287.1 EFh_DTN 45..205 CDD:320002 34/162 (21%)
EF-hand-like motif 45..86 CDD:320002 9/43 (21%)
EF-hand-like motif 95..129 CDD:320002 11/33 (33%)
EF-hand-like motif 135..171 CDD:320002 7/35 (20%)
EF-hand-like motif 182..205 CDD:320002 2/22 (9%)
ZZ_dystrophin 232..280 CDD:239074 9/47 (19%)
CwlO1 376..691 CDD:443091 97/448 (22%)
ClpA <430..>514 CDD:440308 26/150 (17%)
Blue background indicates that the domain is not in the aligned region.

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