DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kst and sptbn1

DIOPT Version :10

Sequence 1:NP_001097492.2 Gene:kst / 38418 FlyBaseID:FBgn0004167 Length:4337 Species:Drosophila melanogaster
Sequence 2:NP_001362280.1 Gene:sptbn1 / 100145120 XenbaseID:XB-GENE-989148 Length:2358 Species:Xenopus tropicalis


Alignment Length:2578 Identity:775/2578 - (30%)
Similarity:1283/2578 - (49%) Gaps:338/2578 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 FENERIKTLQEERLHIQKKTFTKWMNSFLIKAKMEVEDLFTDLADGIKLLKLLEIISSEKLGKPN 125
            ||..|||.|.:||..:||||||||:||.|.:....:.||:.||.||..|:||||::|.|:|.||.
 Frog    38 FERSRIKALADEREAVQKKTFTKWVNSHLARVSCRITDLYADLRDGRMLIKLLEVLSGERLPKPT 102

  Fly   126 SGRMRVHKIENVNKSLAFL-HTKVRLESIGAEDIVDGNPRLILGLIWTIILRFQIQEIEIDVDEE 189
            .||||:|.:|||:|:|.|| ..:|.||::|:.||||||.||.||||||||||||||:|.:   |.
 Frog   103 KGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISV---ET 164

  Fly   190 NESSEKRSAKDALLLWCQRKTHGYPGVNITDFTNSWRSGLGFNALIHSHRPDLFEYSTIVNSKNS 254
            .::.||:|||||||||||.||.|||.|||.:||.|||.|:.||||||.|||||.::..:   |.|
 Frog   165 EDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKL---KKS 226

  Fly   255 NLD-NLNHAFDTAANELGIPSLLDAEDIDSARPDEKSILTYVASYYHTFARMKNEQKSGKRIANI 318
            |.. ||.:||:.|...||:..|||.|||....||||||:|||.:|||.|::||.....||||..:
 Frog   227 NAHYNLQNAFNLAEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKV 291

  Fly   319 VGQLMDADRKKMQYEGLTTNLLSWIRQKTLELEQRDLPNSLEGIQRELLAFKEYRTIEKPPKYKE 383
            :...::.::...:||.|.::||.||.|..:.|..|...|||.|:|::|.||..|||:|||||:.|
 Frog   292 LDNAIETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLIGVQQQLQAFNTYRTVEKPPKFTE 356

  Fly   384 RSEIEALYFTINTLLKALNQPPYNPQDGQLVNDIEKAWQILEYAEHHREVALRDELLRQEKLEQL 448
            :..:|.|.|||.:.::|.||..|.|::|:|::||.|||:.||.|||.||:|||:||:||||||||
 Frog   357 KGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKLEQL 421

  Fly   449 NYKFEKKSVLREGYLKEMIQVLSDPRY---LRQVDATLKKHEAISADILARVERFNDLTAMAEEL 510
            ..:|::|:.:||.:|.|..:::|...:   |..|:|..||||||..||.|..||...:.|:|.||
 Frog   422 ARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVLAVVAVAREL 486

  Fly   511 DRENYHGKERVRRREQEVMAKWRQLLELLENQRLNLSQMSNLMNLLREIASTTEAVRELQQQFAS 575
            :.||||..:|:..|:..|:..|..|||||:.:||.|.....|..:.:|:....:.:.|::....|
 Frog   487 EAENYHDIKRITARKDNVIRLWEYLLELLKARRLRLEMNLGLQKVFQEMLYIMDWMDEMKVLLLS 551

  Fly   576 EDVGPHLLGVEELLQAHSLQELQVNTYGETLKRFNRQALPYKSS----EHKDAALLAQRLADLEE 636
            :|.|.||||||:|||.|:|.|..:....:.::..|..|..:.:.    :..|..::..|:|.:|.
 Frog   552 QDYGKHLLGVEDLLQKHALVEADIAIQADRVRAVNASAQRFATGGEGYKPCDPQVIRDRVAHMEF 616

  Fly   637 AYSELLRRSAARRARLEEARNFHHFMEDYDNEESWLVDKQRICKTGITAKDLRAVLSLQQKHKAL 701
            .|.||.:.:|.|||||||:|....|..:...||.|:.:|::|..:....|||.:|:.|..||||.
 Frog   617 CYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQILSSDDYGKDLTSVVRLYCKHKAF 681

  Fly   702 EDEIKSRKPKSGQMSTAGKRLIGEQHPRSSEIQSRIDSLAEHWQALEALVELRRRQLEDAAEAYQ 766
            |||:..|.....|....|:.:|.|.|..|.:|:.||..:.|.|..||.|..:|:::|||...:||
 Frog   682 EDEMSGRSGHLLQTIKEGEEMIAEDHFGSEKIRERIKDIQEQWANLEHLSAIRKKRLEDTTSSYQ 746

  Fly   767 FYTDANEAESWLNEKIALVNSRDYGNDEPSAQALLQRHRDLQGELNAYSGDILNLNQQADKLIKA 831
            |..||::.::|:.:.:.:|:|.|.|:||.|.|:|:::|:|:..|:..|...|..|::||      
 Frog   747 FQADADDVDAWMLDILRIVSSSDVGHDEYSTQSLVKKHKDVAEEIANYRSTIDALHEQA------ 805

  Fly   832 GICTLELSAAEPELPEVEQEEWVNETRLVPKEVWEDEWVEKLEHKKVTETKMLPHVKSLFPFEGQ 896
                    ||.||                                                    
 Frog   806 --------AALPE---------------------------------------------------- 810

  Fly   897 GMKMDKGEVMLLKSKTNDDWWCVRKDNGVEGFVPANYVREVEPRPVACIVPKAEKVKSLQKVKKT 961
                                         |.|                                 
 Frog   811 -----------------------------ERF--------------------------------- 813

  Fly   962 ILVRQVVPVKRIKPVSVAPKPLVQRRTSTQSINENADSVEKRQQRINQTYDELQEMAQKRHALLE 1026
                                              |:..|:.|...|.:.|.||.|:|:.|...|:
 Frog   814 ----------------------------------NSTDVQNRLSGIEERYKELAELARLRKQALQ 844

  Fly  1027 DSIHLFGFYRECDDFEKWMKEKERMIKS----DEGEGVDNAKRKFEKFITDLSAASKRVEEIDGA 1087
            |::.|:..:.|.|..|.|:.|||:.:.:    ::.|.::..:.:||....:::..:.||..::..
 Frog   845 DALTLYKMFSEADACELWIVEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNNQASRVAVVNQI 909

  Fly  1088 VDTFRRQGHSQLDKIIARQRQIHQIWQRLNNAKAQREKSLEGASSVELFNRTCDEAKVWMSEKML 1152
            .......||....:|.|:|.:::..|.:......:.:.:|..|.|::.::..|:|.|.|:.||..
 Frog   910 ARQLIHSGHPSEKEIKAQQDKLNTRWSQFRELVDKTKDALSSALSIQNYHLECNETKSWIREKTK 974

  Fly  1153 QLD-TAVITPDLRTVQALQRRHQNLERELAPVEDKVNRVTYLGNSVKNAYPAEKDNVNARQQEVQ 1216
            .:: |..:..||..|.||||:...:||:||.:|.|:..:......::..:|.:...:..|..|:.
 Frog   975 VIESTQELGNDLAGVMALQRKLTGMERDLAAIEAKLTDLQKEAEKLEAEHPDQAQAIMDRLAEIN 1039

  Fly  1217 DMWQQVQQRGSDLRNRIESEVGQ----QVFNNSAKVLLAWIDSVKDQLNADESARDVETANNLLK 1277
            ::|::::   :.|:||.|| :|:    |.|........:|:...:..:.:::....:..|..||.
 Frog  1040 NVWEEMK---TTLKNREES-LGEASKLQQFLRDLDDFQSWLSRTQTAIASEDMPNTLAEAEKLLT 1100

  Fly  1278 KHNDLGDDIRAHDTEFVEVIQLGKQLSDGKPNMAETVAVIERLKAEQ---DAIHRGWAEKQKWLL 1339
            :|.::.::|..::.::.::..:|:.::.|:.: |:.:.:.:||:|..   :.:|:.|..:|..|.
 Frog  1101 QHENIKNEINNYEEDYQKMRDMGEMVTQGQTD-AQYMFLRQRLQALDTGWNELHKMWENRQSLLS 1164

  Fly  1340 QCVDLQMFNREADKIDATTKSHEAFLEYNNLGASLDEVEAILKRHLDFEKSLMAQDKILKGFSDN 1404
            |....|:|.|:..:.:|...:.|..|.:..|..:|:..||.:|...||..::.|.::.:....|.
 Frog  1165 QSHAYQLFLRDTKQAEAFLNNQEYVLAHTELPNNLEAAEAAIKTQEDFMTTMDASEEKINAVVDT 1229

  Fly  1405 ADKLISNDHYDSKYIGDRRNQVLGKRKAVKDRAFERKRL--LQASKDFHKFAAEADDLKVWLQDK 1467
            ..:|:::::.:|..|.::.:.:..:.|  |:||.....|  |:.:::..||..:..:|.:|:.:|
 Frog  1230 GRRLVNDENINSDKIEEKVDSIDSRHK--KNRAGANDLLMRLKDNREMQKFLQDCQELSLWINEK 1292

  Fly  1468 TRIAGDENYRDLSNLPRKLQKHQAFERELRANEGQLRNVTKDGQALVQAGNRVPEVES----RVA 1528
            ...|.|.:|.:..||..|..|||||..||.:|:..|..:.|:|..|:.   ..||.|:    :::
 Frog  1293 MLTARDMSYDEARNLHSKWLKHQAFMAELASNKEWLDKIEKEGNQLIA---EKPETEAIVKEKMS 1354

  Fly  1529 DLNKRWKDLLTLSEDKGRKLEQAASQREHNRSLEDAKKKVDELDSALRSGDVGNDLRSCKDLINK 1593
            .|:..|::|.:.::.|.::|..|.......:|..|..|.:..|:|.::|.|.|.||.|...|:.|
 Frog  1355 ALHAMWEELESTTQTKAQRLFDANKAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKK 1419

  Fly  1594 QQILESEITIWDQKVAELVSTGDDMAHGGHFNAQNIEAGTKELQQRFKDLRDPTQRRRAKLEESL 1658
            ||:||:::.:..::|.||.|....::..|. :...::...:.::.||.:|..|...|:..|..|.
 Frog  1420 QQMLENQMDVRKKEVEELRSQAQALSQEGK-STDEVDGQRQVVEVRFIELLAPLNERKKYLLASK 1483

  Fly  1659 NYHKFVFELDSEFQWINEHLPAAKSNELGQNLHQAQSLHKKHKKLEAEIKGHQPMINKALVAGQS 1723
            ..|:|..:::.|..|:.|.:|.|.|.:.|.||...|.|.||::.|:.||:|||...:......:.
 Frog  1484 EIHQFNRDVEDEILWVEERMPLATSTDHGHNLQTVQLLMKKNQTLQKEIQGHQHRNDDIFERSKM 1548

  Fly  1724 LISQQHPEREQVESLCQQLEQAWQDLERHCGERSRKLDMSLKAQQYLFDAGEIESWLGERNNVLR 1788
            ::.......|.:......|:..|..|.....:|.|:|:.|.:||||.||..|.|:|:.|:...:.
 Frog  1549 ILDDSSLNAEAITQRLADLQALWSLLIEETEKRHRRLEESHRAQQYYFDGAEAEAWMSEQELYMM 1613

  Fly  1789 STEYGRDRDSAAKLLTKHKTIELELDTYSGIVTEMGHSCAAMVAANHPDSKVLAAKQQLIEKMLK 1853
            |.|..:|..||..:|.||:.:|..::.|:..|.::..:..|:||..||:|:.::.:|..::|:..
 Frog  1614 SEEKAKDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVAEGHPESERISMRQSQVDKLYA 1678

  Fly  1854 SLHKLASQRQGRLMESLYKHEYFLESDEVEQWIREQEQAASSEDYGQDFEHLQLLQNKFDDL-KH 1917
            .|..|:.:|:|:|.|.....:...|.|::||||.|:|..|.|.:.|||:||:.:||.:|.:. :.
 Frog  1679 GLKDLSEERRGKLDERQRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARD 1743

  Fly  1918 RVEVGADRVDQCELLAKKLIDSESPYANEVEKRQEQLRTSWENLLQLLNQREQKLHAAGEIHRFH 1982
            ...:|.:|||....:|..||:|....|..:.:.::.|..:|.:||:|::.|.|.|.|:.|:|:|:
 Frog  1744 TGHIGQERVDSVNHMADDLINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASFELHKFY 1808

  Fly  1983 RDVAEALFRIQDKNAALSQELGRDLNSALALLRKHEGFENDLVALEAQLQVLVEDSVRLQAKYPS 2047
            .|..|...|||||:..|.:|||||.|:...|.|.|..||:|:.||..|::.|.||:.||||.|..
 Frog  1809 HDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYAG 1873

  Fly  2048 N-ASAIAQQQDKVVAAWNDLKERSTARGDRLAASSDLQTFLTDVRDIVSWSSNLRAALQAEEHVS 2111
            : |..|.:::.:|:.||..|.:....|..||..:.|...|.:.|||::.|..::...::|:|...
 Frog  1874 DKADDIQKRESEVLEAWKALLDACDGRRLRLVDTGDKFRFFSMVRDLMLWMEDVIRQIEAQEKPR 1938

  Fly  2112 DAAGATALKIQHDAIYGEIEAREDKFRYLNELSDSMVQTGHYAAADVEEKCAAMLDERQKLHAAW 2176
            |.:....|...|..|..||:||.|.|....||..|::...|||:.:::||...:.::|:::...|
 Frog  1939 DVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKEKLLQLTEKRKEMIDKW 2003

  Fly  2177 NKKKIMLEQKIDLFCFLRDAKQIDNLSSSQQAALSSSDFGQTVEDVQNKIRKHDEFERLIQTQEE 2241
            ..:...|...:::..|.|||...:.....|:..|||.:.||:|::|:..|::|:.||:...|.:|
 Frog  2004 EDRWEWLRLILEVHQFSRDASVAEAWLFGQEPYLSSREIGQSVDEVEKLIKRHEAFEKSAATWDE 2068

  Fly  2242 KVSLLQEHGRKLIEQRHYDSANIQTILQGVLARRQKVKDLCAVRRYKLEDALLYAKFVRDCAEAK 2306
            :.|.|:.                .|.|:.:..||.:.::   .|:.|.....|..|...| ...:
 Frog  2069 RFSALER----------------LTTLELLEVRRLQEEE---ERKRKPPTPELSPKLSED-GSPQ 2113

  Fly  2307 YWINEK------QKKLEADAAS--YAEVTNLDEKIKKLQKHQA--------------------FQ 2343
            .|...|      |..|.:|..|  .||..:.:|.:....:.::                    .|
 Frog  2114 QWDGTKEGEQISQNGLPSDQESPRMAENADTNELVNGSTEQRSSSKESSPIPSPTADRKSKSGMQ 2178

  Fly  2344 AEVAAN-QGRIQEI---QDTGVILLSKQHESSPEIKRAIEIVLEAWQGLLAELEQRGRGLEEAQD 2404
            .:.||. ..:.||:   |..|  .|.::||.....|:|..   .:|..:...:..:..|..:   
 Frog  2179 PQTAATLPAKTQEMPSAQFEG--FLHRKHEWEGHNKKASS---RSWHNVYCVINNQEMGFYK--- 2235

  Fly  2405 SLEFNSQLDKIEAWIRDKEMMVQASDTGRDLEHCNALMRKLDDVDSDMRVDDQRVKHINQL---- 2465
                                  .:.:....:.:.|.:...|.:...::..|.::.||:.:|    
 Frog  2236 ----------------------DSKNAASGIAYHNEIPANLKEAVCEVATDYKKKKHVFKLKLND 2278

  Fly  2466 ADKLINQAQVPADTQSVDKRRKDFNYNWRQLQGALNAYRALLGGANEIHVFNRDVDDTADRIAEK 2530
            .::.:.||          |..::.| .|  :|...||.                   |:|: .|.
 Frog  2279 GNEYLFQA----------KDDEEMN-TW--IQAITNAI-------------------TSDK-TEV 2310

  Fly  2531 SLAMSSTDTGRDLAAVEALI-------RREEALERDMSAVKQK 2566
            ||:..||........:.|.:       :||:..|:|    |:|
 Frog  2311 SLSTQSTPASSRAQTLPASVTVTDSPGKREKDKEKD----KEK 2349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kstNP_001097492.2 CH_beta_spectrin_rpt1 61..176 CDD:409042 67/115 (58%)
CH_beta_spectrin_rpt2 196..302 CDD:409043 64/106 (60%)
SPEC 450..640 CDD:238103 66/196 (34%)
SPEC 658..832 CDD:238103 60/173 (35%)
SH3 885..935 CDD:214620 2/49 (4%)
SPEC 1030..1236 CDD:238103 50/210 (24%)
SPEC 1134..1341 CDD:238103 48/214 (22%)
SPEC 1343..1551 CDD:238103 55/213 (26%)
SPEC 1449..1658 CDD:238103 60/212 (28%)
SPEC 1555..1764 CDD:238103 57/208 (27%)
SPEC 1765..1975 CDD:238103 70/210 (33%)
SPEC 1873..2080 CDD:238103 79/208 (38%)
SPEC 1979..2185 CDD:238103 71/206 (34%)
SPEC 2188..2402 CDD:238103 52/245 (21%)
SPEC 2407..2618 CDD:238103 28/171 (16%)
SPEC 2514..2725 CDD:238103 14/60 (23%)
SPEC 2726..2934 CDD:238103
SPEC 2935..3145 CDD:238103
SPEC 3042..3251 CDD:238103
SPEC 3149..3357 CDD:238103
SPEC 3359..3567 CDD:238103
SPEC 3465..3680 CDD:238103
PH_beta_spectrin 3801..3904 CDD:269975
sptbn1NP_001362280.1 CH_SF 2..154 CDD:469584 67/115 (58%)
CH_SPTB_like_rpt2 171..275 CDD:409097 64/106 (60%)
Spectrin 300..410 CDD:395348 53/109 (49%)
Spectrin 420..523 CDD:395348 42/102 (41%)
SPEC 528..740 CDD:238103 71/211 (34%)
SPEC 640..847 CDD:238103 78/368 (21%)
SPEC 745..953 CDD:238103 61/369 (17%)
SPEC 956..1167 CDD:238103 49/215 (23%)
SPEC 1169..1378 CDD:238103 55/213 (26%)
SPEC 1379..1589 CDD:238103 57/210 (27%)
SPEC 1590..1801 CDD:238103 70/210 (33%)
SPEC 1803..2024 CDD:238103 75/220 (34%)
Spectrin 2014..>2072 CDD:395348 18/57 (32%)
PH_beta_spectrin 2197..2302 CDD:269975 20/147 (14%)
Blue background indicates that the domain is not in the aligned region.

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