DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17746 and ppm1kb

DIOPT Version :10

Sequence 1:NP_647794.1 Gene:CG17746 / 38400 FlyBaseID:FBgn0035425 Length:371 Species:Drosophila melanogaster
Sequence 2:NP_001314673.1 Gene:ppm1kb / 503713 ZFINID:ZDB-GENE-050306-8 Length:372 Species:Danio rerio


Alignment Length:274 Identity:86/274 - (31%)
Similarity:139/274 - (50%) Gaps:37/274 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 RVGSSCMQGWRINMEDSHTHILSLPDDPGAAFFAVYDGHGGATVAQYAGKHLHKYVLKRPEYNDN 87
            ||||:...|.|...||.: .:..:.|:  ..:|||:||||||..|.:..|::.|::........|
Zfish    94 RVGSASQIGQRKENEDRY-QMSQMTDN--IMYFAVFDGHGGAEAADFCHKNMEKHIKDIAAEETN 155

  Fly    88 IEQALQQGFLDIDYVMLR----NKTCGDQMAGSTAVVVLVKDN-KLYCANAGDSRAIACVNGQLE 147
            :|..|.:.||::|..:.|    :.......||:||.|.|::|. :|...:.|||||:.|..|:..
Zfish   156 LEFVLTKAFLEVDKALARHLHFSADASVLSAGTTATVALLRDGIELVVGSVGDSRAMMCRKGKAV 220

  Fly   148 VLSLDHKPNNEAESKRIIQGGGWVEFN-----RVNGNLALSRALGDYVFKHENKKPEDQIVTAFP 207
            .|::||.|..:.|.:||.:.||::.:|     .|||.||::|::||:..|...       |.|.|
Zfish   221 KLTVDHTPERKDEKERIRRSGGFITWNSLGQPHVNGRLAMTRSIGDFDLKATG-------VIAEP 278

  Fly   208 DVETRKI----MDDWEFIVLACDGIWDVMSNAEVLEFCRTRIGMGMFPEEICEELMNHCLAPDCQ 268
              ||::|    :.| .|:.|..|||..:|::.|:.:.    |.....|:|..:.:....|    |
Zfish   279 --ETKRISLHHVHD-SFLALTTDGINFIMNSQEICDV----INQCHDPKEAAQRISEQAL----Q 332

  Fly   269 MGGLGGDNMTVVLV 282
            .|  ..||.|:::|
Zfish   333 YG--SEDNSTIIVV 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17746NP_647794.1 PP2Cc 22..284 CDD:238083 86/274 (31%)
ppm1kbNP_001314673.1 PP2Cc 94..346 CDD:238083 86/274 (31%)

Return to query results.
Submit another query.