DRSC/TRiP Functional Genomics Resources

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Protein Alignment Girdin and Hook2

DIOPT Version :10

Sequence 1:NP_647780.1 Gene:Girdin / 38385 FlyBaseID:FBgn0283724 Length:1381 Species:Drosophila melanogaster
Sequence 2:XP_036009672.1 Gene:Hook2 / 170833 MGIID:2181664 Length:833 Species:Mus musculus


Alignment Length:758 Identity:163/758 - (21%)
Similarity:300/758 - (39%) Gaps:192/758 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 CLPRAELLAGYTSLLDGHIIHSVWLQIDPEPQNNP--SELNDLNGKSLSIARAKNFECVVRNLKS 89
            |....:|.:|   |...|:::    ||||...||.  ..:::.:..|..: :.:..|.::::|..
Mouse    76 CASPQDLSSG---LAIAHVLN----QIDPSWFNNEWLQGISEDSSPSWRL-KVRKLEKILQSLVE 132

  Fly    90 FFEEELGQTI--LVLPDAFTLGHHPESKNGLEQMKTLLTLLLGAAVQCPNKELFIARIKELDLET 152
            :.:..||..:  ..|||...:|   |..|..|..| ||.|:||.|:.|..|:.:|.||..|:...
Mouse   133 YSKNVLGHPVSDQHLPDVSLIG---EFSNPAELGK-LLQLVLGCAISCEKKQEYIQRIMTLEESV 193

  Fly   153 QHAIVGLIKQVTDSHSLVLTEDSLERLTPQS---------MYTHILRLTKERDVMYLKWIDLACV 208
            ||.::..|::       ::|:|:.:.|:|::         .|..:....:|.|.:...::||   
Mouse   194 QHVVMEAIQE-------LMTKDTPDSLSPENYGNFDTQSRRYYFLSEEVEEGDHLQQHYLDL--- 248

  Fly   209 ETEM----TASDNLVECGQGVSVTRSPSNGTATSTPSSSSNSESNHLAVECADLRSKNRKLRQEL 269
            |.::    ....||.:  :..::..........|.|..:: .:...|..:...|:.:|.:|....
Mouse   249 ERQLLLLSEEKQNLAQ--ENAALRERVGRSEVESAPGLTA-KKLLLLQSQLEQLQEENFRLESSR 310

  Fly   270 EEKSENLLELREELDDKKARFDKLRQESQEWFTEAKRASAYRDEVDILRERAERADRLEVEVQKY 334
            |:.....|||..|:.:.:.|...|...|||       |.|.:||:|.||:.:|||.:||..:...
Mouse   311 EDDRLRCLELEREVAELQQRNQALTSLSQE-------AQALKDEMDELRQSSERARQLEATLNSC 368

  Fly   335 REKLGDSDFYKSRVEELREDNRVLLESKEMLEEQLQRYRKRSEHAISLESEIIKYKQKINDMALE 399
            |.:||:....:.:|.:|.|.|....|....|||:|:|       |.||.:::...::::.::..:
Mouse   369 RRRLGELQELRRQVRQLEERNAGHAERTRQLEEELRR-------AGSLRAQLEAQRRQVQELQGQ 426

  Fly   400 RDVDRSKLEELLEENSQLQLVARNLNSTMDL------------DKSFSENE-------------- 438
            ...:..|.|:.|.|       .|||....||            |.....||              
Mouse   427 WQEEAMKAEKWLFE-------CRNLEEKCDLVTKEKERLLTERDSLREANEELRCAQLQPRGLAQ 484

  Fly   439 -----DDCNSG-DNSLSEQLTNNAQTRALKLELENRRLTAALEQLKESSFHESTSKMLELEKEKK 497
                 |...|| :|..:|.|....:...::|:|||:||  ..::..:....|...:.|| |..:.
Mouse   485 ADLSLDPTPSGLENLAAEILPAELRETLVRLQLENKRL--CQQEAADRERQEELQRHLE-EANRA 546

  Fly   498 KLSLKIEQMQENINRLTQQNVELEGVFKNALEENKKLQD-------------------------- 536
            :..|:.:| :.|..:|::...::|.:.|...|:..|.:|                          
Mouse   547 RHGLEAQQ-RLNQQQLSELRAQVEELQKALQEQGGKTEDVSACLLPAWPSLVLPSNPPFSLPPCC 610

  Fly   537 ----------------------------------AVDNRQKSYDRQSLEREADRQKLSDAE---- 563
                                              |....|.:..::.||...  |||.:|:    
Mouse   611 PMPEEGHCEYHGSREAHHCYLHSFSDLVPVPSLPAASLPQPTLLKRKLEDHL--QKLHEADLELQ 673

  Fly   564 ---QHVETL-----NKEKQRIQTLNESIQRRADDLERLAE------SKTKELEQYLEK------- 607
               :::|.|     :...:||:.|.:|:|::..||..:.|      .|.:.:.|.||.       
Mouse   674 RKREYIEELEPPTDSSTARRIEELQDSLQKKDADLRAMEERYRRYVDKARTVIQTLEPKQRPPTV 738

  Fly   608 -SRQYELTKQKLYEIEARVSTYERENASLLKEVSKLKEGSEQK 649
             |.::...:.:|:|...|:...|.:     .|.|:.::..|:|
Mouse   739 VSPEFHTLRSQLWERNLRIRQMEMD-----YEKSRRRQEQEEK 776

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GirdinNP_647780.1 HkD_HkRP 15..165 CDD:411794 39/141 (28%)
SMC_prok_B 315..1110 CDD:274008 92/453 (20%)
Hook2XP_036009672.1 HkD_SF 67..207 CDD:425405 39/149 (26%)
HOOK 230..819 CDD:461694 119/585 (20%)

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