DRSC/TRiP Functional Genomics Resources

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Protein Alignment Girdin and hook2

DIOPT Version :10

Sequence 1:NP_647780.1 Gene:Girdin / 38385 FlyBaseID:FBgn0283724 Length:1381 Species:Drosophila melanogaster
Sequence 2:XP_002938530.1 Gene:hook2 / 100497596 XenbaseID:XB-GENE-991660 Length:721 Species:Xenopus tropicalis


Alignment Length:807 Identity:166/807 - (20%)
Similarity:314/807 - (38%) Gaps:240/807 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 SIISWLES------CLPRAELLAGYTSLLDGHIIHSVWLQIDPEPQNNPSELNDLNGKSLSIARA 77
            |:::|:::      |       :.|..|..|..|..|..:||      ||..|:.....:.....
 Frog    12 SLLTWMQTFQVSGPC-------SSYEDLTGGVAIAQVLNRID------PSWFNEAWLVRVKQDTT 63

  Fly    78 KNFECVVRNLK-------SFFEEELGQTIL--VLPDAFTLGHHPESKNGLEQMKTLLTLLLGAAV 133
            :|:...|.|||       .::::.||..:.  .:||...:|   |..|..| ::.::.|:||.|:
 Frog    64 ENWRIKVSNLKRILQSILEYYQDVLGHPVSDDHIPDVALIG---EFSNAAE-LRKMVQLVLGCAI 124

  Fly   134 QCPNKELFIARIKELDLETQHAIVGLIKQVTDSHSLVLTEDSLERLTPQSMYTHILRLTKERDVM 198
            .|..||..|.:|..|....|.|::..|::       :|::|..:.:|.:|   :|...::.|...
 Frog   125 SCDKKEEHIQQIMTLGESVQQAVMESIQE-------LLSKDPTDAVTSES---YINYDSQSRKYY 179

  Fly   199 YLKWIDLACVETEMTASDNLVECGQGVSVTRSPSNGTATSTPSSSSNSESNHLAVECADLR---- 259
            :|                                         |..|.|.|.:...|.||.    
 Frog   180 FL-----------------------------------------SEDNDEKNEILQRCHDLEQQVS 203

  Fly   260 ----------SKNRKLRQELEEK--------SENLLELREEL--------------DDKKAR--- 289
                      .:||.||::.|:.        ::.||.|:.::              ||.:.|   
 Frog   204 LLMEEKKNLVGENRNLREQQEQSGMGTPQLFNKKLLLLQSQIEQLQEENYRLESSRDDYRQRCQE 268

  Fly   290 ----FDKLRQESQEWFTEAKRASAYRDEVDILRERAERADRLEVEVQKYREKLGDSDFYKSRVEE 350
                ..:|:|.:|:....|..|.|.|||:|:||..::|..:||..|:.|::||.|....:.:|:.
 Frog   269 LDRDIQELQQRNQDLTGLAHEAQALRDEMDVLRHSSDRVGKLESLVESYKKKLEDLGDLRRQVKL 333

  Fly   351 LREDNRVLLESKEMLEEQLQR------------------YRKRSEHAISLES---EIIKYKQKIN 394
            |.|.|.|.::....|||:|.:                  ::|.|..::..|.   |....|:|..
 Frog   334 LEERNTVYMQRTCQLEEELHKANASRGQLENLSRQIQELHKKHSTESLRAEKWQFEFQTLKEKFE 398

  Fly   395 DMALERDVDRSKLEELLEENSQLQLVARNLNSTMDLDKSFSENEDDCNSG-----DNSLSEQLTN 454
            .:..||:...::.:.|.|.|.:|:        ...|.::.....|...||     :|..:|.:..
 Frog   399 ALQKERERLITERDSLRETNDELR--------CSHLQQTCLGQADVLLSGSSPPLENLAAEIVPA 455

  Fly   455 NAQTRALKLELENRRLTAALEQLKESSFHESTSKMLELEKEKKKLSLKIEQMQENINRLTQQNVE 519
            ..:...::|:.||:.|..     :|:|:.:....:..|.:|    |.:.:...|:.:||.||.: 
 Frog   456 ELRETVMRLQQENKMLCT-----QEASYQDRLCDLQNLLEE----SNRSKNRMESESRLQQQQI- 510

  Fly   520 LEGVFKNALEENKKLQDAVDNRQKSYDRQSLEREADRQKLSDAEQHVETLN-------KEKQRIQ 577
                        |:|:..|:..||....|....|...|.....|:|:|.|:       |:::.|:
 Frog   511 ------------KELKAQVEELQKHLREQGNRAEDSSQLKRKLEEHLEMLHDAHSELQKKREYIE 563

  Fly   578 TLNE----SIQRRADDLERLAESKTKEL-------EQYLEKSR----------------QYELTK 615
            ||..    ::.|:.::|:::...|.:::       ::|::|:|                :.:..|
 Frog   564 TLEPKADLNMSRKVNELQQILRQKEEDMRAMEDRYKRYVDKARTVIKSLDPKQQNCIPPEIQALK 628

  Fly   616 QKLYEIEARVSTYERENASLLKEVSKLKEGSEQKSVQLDDSINRLDVQSKELQKLGKALEDSEQV 680
            .:|.|.:.|:...|.:     .|.:|::...|:|.:            ......:|.||      
 Frog   629 NQLQEKDTRIRHLETD-----YEKTKVQRDHEEKLI------------ISAWYNMGMAL------ 670

  Fly   681 HQKLVELEKQNQELASQRIIDQEMIST 707
            |||..: |:......:|..:.|:.::|
 Frog   671 HQKATD-ERSQPPNGAQSFLAQQRLAT 696

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GirdinNP_647780.1 HkD_HkRP 15..165 CDD:411794 39/160 (24%)
SMC_prok_B 315..1110 CDD:274008 93/453 (21%)
hook2XP_002938530.1 HkD_SF 8..157 CDD:425405 40/168 (24%)
HOOK 180..702 CDD:461694 121/612 (20%)

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