DRSC/TRiP Functional Genomics Resources

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Protein Alignment MnM and mybpc1

DIOPT Version :10

Sequence 1:NP_647779.2 Gene:MnM / 38384 FlyBaseID:FBgn0035410 Length:1443 Species:Drosophila melanogaster
Sequence 2:XP_073802054.1 Gene:mybpc1 / 492356 ZFINID:ZDB-GENE-041114-196 Length:1330 Species:Danio rerio


Alignment Length:596 Identity:157/596 - (26%)
Similarity:239/596 - (40%) Gaps:90/596 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GNQPGKLHTHPQGGRPKKNVHWKSAERPSPPGRPILTPVALPEQQPDVVNLRWDRPLHDGGSPIT 66
            ||.  |:....:.|....:|..|..:.|.||..|::|.|.     .|...:.|:.|.:||||||.
Zfish   732 GNY--KIVLQNEAGEDTASVKVKVVDIPDPPEAPLVTEVG-----GDWCTMTWEPPRYDGGSPIL 789

  Fly    67 GYTVEHRRMGSPHWVRATPTPVDRCDVC-ISGLEP-----GWRYQFRCFAENIVGRSDASELSD- 124
            ||.:|.::..|..|:|.      ..|:| .:..||     |..|:.|.||.|.:|.|..||.|. 
Zfish   790 GYFIERKKKQSSRWMRL------NFDLCKETTFEPKKMIEGVPYEVRIFAVNAIGVSKPSEPSKP 848

  Fly   125 --PLTVTLQRNAITVPRFIDELVDTNAVEDERIEFRVRILGEPPPEINWF-KDGYEI---FSSRR 183
              ||.||.:...:.|    |::.||.          |.:...||..|... .|||:|   .....
Zfish   849 FIPLAVTSEPTMLVV----DDVTDTT----------VTMKWRPPDTIGAAGLDGYQIEYCIEGTD 899

  Fly   184 TKIVNDNEASVLVIHQV-ALTDEGEI--KCTATNRAGHV---ITKARLMVQ---APPKIRLPRTY 239
            ..||.:.|.:....:.: .|..|.:|  :..|.|.||..   .|:..::|:   .|||||:||..
Zfish   900 DWIVANKELTEKTKYTITGLPVEAKILVRVKAINAAGASQPRTTQHSILVKEVIEPPKIRIPRHL 964

  Fly   240 EDGLIVEADEVLRLKVGVAGQPPPAITWLHEGEVIAPGGRFEVSNTEKNSLLKIDNVLREDRGEY 304
            :...|.:..||:.|.|...|:|.|.:|||.||:.|.|  ...:.|::.:|::.|....|:..|:|
Zfish   965 KQTYIRKVGEVVNLVVPFVGKPRPKVTWLKEGQPIDP--TISIRNSDCDSIMFIRKAERKHSGKY 1027

  Fly   305 --MVKAWNRLGEDSTSFLVTVTARPNPPGTPKLNMSFGKSATLSWTAPLDDGGCKIGNYIVEYFR 367
              .|:..|.:  |:....:.:...|.||...|:...:|.:..|.|:.|.|.|...|..|.::...
Zfish  1028 ELSVQVENHI--DTAMLDIQIVDLPGPPQAVKIEEIWGNNVALDWSPPKDSGNAPITGYTIQKAD 1090

  Fly   368 VGWNVWLKAAT-TRALSTTLHDLIEGSEYKFRVKAENPYGLSEPSGESELLFIPDPKRGITKPKS 431
            .....|..... ......|:.||:.|:||.||:.:||..||||.:               |..|.
Zfish  1091 KKTMEWYTCVEHYHRTCITISDLVVGNEYFFRIYSENMVGLSEDA---------------TATKD 1140

  Fly   432 ATRIAGDEKDKPKTGAGGMQVPPRRKTLSPPRPQADASTGMSPKQSPSAKRKPKPQLID------ 490
            :..|..:.|....|.......  :..|..|....:.:|:..|...|.|......|:..|      
Zfish  1141 SALIVKEGKFPHDTALSSYHA--KSHTPFPSHSSSSSSSSRSSSHSQSGLHLKNPEYNDRDFTEP 1203

  Fly   491 ---NEQLTHEMSYGTSDHALKMDVRKSPSLNSADSANKPTTDSSNPKLNL-------TLVTTTLA 545
               .:.|.:..:....:..|...||.:|........|| .|...:|:..:       ||.....:
Zfish  1204 PRFTQPLINTFAIAGYNATLNCSVRANPRPKVVWMKNK-ITIIDDPRYRMFHNQGVCTLEIRKPS 1267

  Fly   546 PLDKSVPSPKA 556
            |.|..|.:.||
Zfish  1268 PFDGGVYTCKA 1278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MnMNP_647779.2 FN3 29..127 CDD:238020 37/106 (35%)
I-set 138..227 CDD:400151 22/98 (22%)
Ig strand B 155..159 CDD:409565 0/3 (0%)
Ig strand C 168..172 CDD:409565 1/3 (33%)
Ig strand E 194..197 CDD:409565 0/2 (0%)
Ig strand F 207..212 CDD:409565 1/6 (17%)
Ig strand G 220..223 CDD:409565 1/2 (50%)
Ig 243..323 CDD:472250 24/81 (30%)
Ig strand B 251..255 CDD:409353 1/3 (33%)
Ig strand C 264..268 CDD:409353 1/3 (33%)
Ig strand E 289..293 CDD:409353 1/3 (33%)
Ig strand F 303..308 CDD:409353 2/6 (33%)
Ig strand G 316..319 CDD:409353 0/2 (0%)
FN3 327..411 CDD:238020 27/84 (32%)
PHA03247 <420..718 CDD:223021 29/153 (19%)
mybpc1XP_073802054.1 None

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