DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment BtbVII and bab1

DIOPT Version :10

Sequence 1:NP_647774.2 Gene:BtbVII / 38376 FlyBaseID:FBgn0263108 Length:907 Species:Drosophila melanogaster
Sequence 2:NP_728565.1 Gene:bab1 / 38116 FlyBaseID:FBgn0004870 Length:977 Species:Drosophila melanogaster


Alignment Length:972 Identity:228/972 - (23%)
Similarity:322/972 - (33%) Gaps:378/972 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQALFTTNPCQ 66
            |.|||||||||:|.|..::...||.|...||||||.:||.::|||:||||||.|||.|....|||
  Fly    98 SSQQFCLRWNNYQTNLTTIFDQLLQNECFVDVTLACDGRSMKAHKMVLSACSPYFQTLLAETPCQ 162

  Fly    67 HPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAE--------------- 116
            |||||::||.:.|||.:|:|||.||:||||:|:..:|:.|||||::|||:               
  Fly   163 HPIVIMRDVNWSDLKAIVEFMYRGEINVSQDQIGPLLRIAEMLKVRGLADVTHMEAATAAAAAAS 227

  Fly   117 ---MPTDPANLTKSDSKSSTDGTE-------------MVGGAGVGTGAGNSA----GSLGAGSGS 161
               ||:.|...|      ||..||             |.....:.|...:.|    ..|....|.
  Fly   228 SERMPSSPKEST------STSRTEHDREREAEELLAFMQPEKKLRTSDWDPAELRLSPLERQQGR 286

  Fly   162 SVGDSLWSSSE-----------------AQQFQQQQQQQAQQQ---------------------- 187
            :|....|.|::                 |::.:.:|:::.:|:                      
  Fly   287 NVRKRRWPSADTIFNPPAPPSPLSSLIAAERMELEQKERERQRDCSLMTPPPKPPMSSGSTVGAT 351

  Fly   188 ---------------------AQQQHHHHQQQQQLQQQQQQAQQQQQQQQHHHHH-----HQQQQ 226
                                 ..:....|.|..|.||.|||.|.......|.|||     |..|.
  Fly   352 RRLETAIHALDMPSPAATPGPLSRSSRPHSQSPQQQQAQQQGQLPLPLPLHPHHHASPAPHPSQT 416

  Fly   227 SGQAQAAQTHHHQMRRTPSPLS-AGTS-----PATRRKRLRKSSNNGSGDRNNAEEQ------HN 279
            :|.|      ||       |.| ||.|     ||......|:.|..|.|.  :||.:      |:
  Fly   417 AGSA------HH-------PASPAGDSRFPLGPAAAMAAARELSGLGPGP--SAEPRLPPPPPHH 466

  Fly   280 SSLDAGSGAGNAGLSLAQMNQMTFGAGG-GLAGHSLHA---------AKLLKESASAELEQ---- 330
               ..|.|.|..|:...       |||| |..|.|..|         |::::|...|::.:    
  Fly   467 ---HGGGGVGGGGVGGG-------GAGGVGSGGGSSLADDLEIKPGIAEMIREEERAKMMENSHA 521

  Fly   331 -----------------------------------------------QPQD------SDLDDG-- 340
                                                           :|:.      |.|.:|  
  Fly   522 WMGATGSTLAADSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLS 586

  Fly   341 ------------------HGHLHMQIKPEVDIGGVN-----QTMPLDISGGTTPSEH-------- 374
                              ...:|..:.|.:| ||.:     :..|..|..|..|.||        
  Fly   587 LSQAARKYDIPYPTFVLYANRVHNMLGPSID-GGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTV 650

  Fly   375 ---DAPN----SQSSHSEPSPAHAPHPPHPPLGAASSSSGGSGSFERSFSIGGVGSVECDPDGTP 432
               |..:    |.::|..|...|:|..|...|  ..|..|.||:.     .|...|:.| |:|:.
  Fly   651 VFRDTKDIKDESLAAHMPPYGRHSPAFPLQDL--PLSYPGASGAL-----AGAPSSMAC-PNGSG 707

  Fly   433 SSPAVMGTKRNRVLTRQPRVKRDSDSISSTNQISPDTAATTLD------------------FD-- 477
            ....|                    .::....:|.:|||....                  |:  
  Fly   708 PQTGV--------------------GVAGEQHMSQETAAAVAAVAHNIRQQMQMAAVPPGLFNLP 752

  Fly   478 ------------PFNAAGATSATARDYSTTGSHH---------------------LHH---QSAV 506
                        |..|.|..|.:....|.:|..|                     |||   |.|.
  Fly   753 PHPGVGGGVGNVPGAAGGRASISPALSSGSGPRHAPSPCGPAGLLPNLPPSMAVALHHQQQQQAA 817

  Fly   507 HHHHHLLTVPPRIERHASEPAPSLAPSTPHLLSVPSSTPYLIKQHSDPLLPRQSALHMAG----- 566
            |||...|               .|.....||           ..|......:|...|..|     
  Fly   818 HHHMQQL---------------HLQQQQAHL-----------HHHQQQQQQQQQQHHQGGHQVAH 856

  Fly   567 -SGSGSSSAMATGSNPFAPLH--RQYSHPLSGSNASYVTPAPLHHP-HHISLPESIYASGSPPPA 627
             ||.|:||:.:..|:.....|  :..|.||...     ||. ||.| ..:.|..:.|.....|..
  Fly   857 KSGFGASSSSSASSSSMGQHHAPKAKSSPLRSE-----TPR-LHSPLGDLGLDMASYKREFSPSR 915

  Fly   628 GSSQYLVPTRVVACPVVSSETAATPTNASPGSSSTVSAAVSVVTSPNAGLQNSASRHPLSPT 689
            ..::.|  ..:|...|.||.::|....|.|..|:..::|.:...:|::.........|::.|
  Fly   916 LFAEDL--AELVGASVSSSSSSAAAATAPPERSAGAASAATGADAPSSSSSGGIKVEPITTT 975

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BtbVIINP_647774.2 BTB_POZ_BAB-like 30..113 CDD:349624 51/82 (62%)
bab1NP_728565.1 BTB_POZ_BAB-like 126..209 CDD:349624 51/82 (62%)
HTH_psq 569..614 CDD:283007 5/44 (11%)

Return to query results.
Submit another query.