DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1271 and Atad2

DIOPT Version :10

Sequence 1:NP_647763.1 Gene:CG1271 / 38364 FlyBaseID:FBgn0035392 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_081711.2 Gene:Atad2 / 70472 MGIID:1917722 Length:1364 Species:Mus musculus


Alignment Length:141 Identity:30/141 - (21%)
Similarity:54/141 - (38%) Gaps:32/141 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   357 AVYCIEGASHDFGTVVTWAQSCEL---FDSPANTS-----DIAQSVPDTNDVFFMPAFSGLGPPV 413
            |.:|:.....|..::...|..|.|   :.....||     |::.......|  |..|...:.|  
Mouse   607 AEHCVGYCGADIKSICAEAALCALRRRYPQIYTTSEKLQLDLSSITISAKD--FEAALQKIRP-- 667

  Fly   414 NDYRSASGFIGLTPSTTKAHMVRALLESIVFRLVQLIEA----AEKETSQKLHMIRVDGGVSRND 474
                 ||.....:|....:.:|:.||::.|.|::..::.    .|..|::.|:          :|
Mouse   668 -----ASQRAVTSPGQALSAIVKPLLQNTVHRILDALQKVFPHVEVGTNKSLN----------SD 717

  Fly   475 FVCQFL-ADLS 484
            ..|.|| :||:
Mouse   718 VSCPFLESDLA 728

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1271NP_647763.1 ASKHA_NBD_FGGY_GK5-like 32..549 CDD:466803 30/141 (21%)
Atad2NP_081711.2 RecA-like_Yta7-like 406..575 CDD:410925
AAA_lid_3 603..637 CDD:465537 6/29 (21%)
ycf46 <766..907 CDD:177094
Bromo_AAA 960..1070 CDD:99957
Blue background indicates that the domain is not in the aligned region.

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