DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG1271 and psmc1a

Sequence 1:NP_647763.1 Gene:CG1271 FlyBaseID:FBgn0035392 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_956327.1 Gene:psmc1a ZFINID:ZDB-GENE-030131-8730 Length:440 Species:Danio rerio

Alignment Length:247 Identity:43/248 (17%)
Similarity:89/248 (36%) Gaps:90/248 (36%)


  Fly    23 ESGPPDSPAFILALDVGTTCVRSFVLDEQC-EVRGSAVDAVELLNPQPGYFE---IEP------- 76
            |..|.::.|     |:|.       ||.|. |::    ::|||....|.|:|   |:|       
Zfish   177 EKAPQETYA-----DIGG-------LDSQIQEIK----ESVELPLTHPEYYEEMGIKPPKGVILY 225

  Fly    77 ------------------ESLWRKIVG-------------VITQAVKNAQLTPPDITCL----TI 106
                              .:.:.::||             ::.:..:.|:...|.|..:    .|
Zfish   226 GAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 290

  Fly   107 STQRCTFLTWDHRSG---EYYHNFITWKDLRADELVDQWNASWTKSSMNWFSYALFLLTRQSRFL 168
            .|:|     :|..||   |.....:        ||::|.:...::..:.     :.:.|.:...|
Zfish   291 GTKR-----YDSNSGGEREIQRTML--------ELLNQLDGFDSRGDVK-----VIMATNRIETL 337

  Fly   169 AGSVLQLMNGQVTPRLLFEIMNNKKLKQALMQKKARVEL-----LDSWILHK 215
            ..::::  .|::..::.|.:.:.|..::......:|:.:     ||..||.|
Zfish   338 DPALIR--PGRIDRKIEFPLPDEKTKRRIFQIHTSRMTVADDVTLDDLILAK 387

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG1271NP_647763.1 GlpK 32..555 CDD:223628 40/239 (17%)
FGGY_GK5_metazoa 32..552 CDD:212665 40/239 (17%)
psmc1aNP_956327.1 PTZ00361 25..440 CDD:185575 43/248 (17%)
Prot_ATP_ID_OB 108..>176 CDD:293059
AAA 222..355 CDD:278434 19/153 (12%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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