DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG1271 and Rpt6

Sequence 1:NP_647763.1 Gene:CG1271 FlyBaseID:FBgn0035392 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_608447.1 Gene:Rpt6 FlyBaseID:FBgn0020369 Length:405 Species:Drosophila melanogaster

Alignment Length:194 Identity:40/195 (21%)
Similarity:71/195 (36%) Gaps:63/195 (32%)


  Fly    76 PESLWRKIVG----------VITQAVKNAQLTPPDITCLTISTQRCTFLTWDHRSGE-------Y 123
            |:|.:..:.|          ||...||:.:|    ...|.|:..:...|.....:|:       .
  Fly   143 PDSTYEMVGGLDKQIKEIKEVIELPVKHPEL----FDALGIAQPKGVLLYGPPGTGKTLLARAVA 203

  Fly   124 YHNFITWKDLRADELVDQWNASWTKSSMNWFSYALFLLTRQ----------------SRFLAGS- 171
            :|...|:..:...|||.::....::....     ||::.|:                ||..:|| 
  Fly   204 HHTECTFIRVSGSELVQKFIGEGSRMVRE-----LFVMAREHAPSIIFMDEIDSIGSSRIESGSG 263

  Fly   172 --------VLQLMNGQVTPRLLFEIMNNKKLKQALMQKKARVELLDSWILHKLRTGSSRDKDVE 227
                    :|:|:| |:..   ||...|.|:..|    ..|:::||..:|...|.    |:.:|
  Fly   264 GDSEVQRTMLELLN-QLDG---FEATKNIKVIMA----TNRIDILDPALLRPGRI----DRKIE 315

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG1271NP_647763.1 GlpK 32..555 CDD:223628 40/195 (21%)
FGGY_GK5_metazoa 32..552 CDD:212665 40/195 (21%)
Rpt6NP_608447.1 RPT1 17..403 CDD:224143 40/195 (21%)
SlyX <27..>69 CDD:294687
AAA_16 152..>205 CDD:289934 10/57 (18%)
AAA 185..317 CDD:278434 30/149 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG0554
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
10.900

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