DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2162 and AT5G22120

DIOPT Version :10

Sequence 1:NP_001163332.2 Gene:CG2162 / 38360 FlyBaseID:FBgn0035388 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_680198.1 Gene:AT5G22120 / 832273 AraportID:AT5G22120 Length:383 Species:Arabidopsis thaliana


Alignment Length:369 Identity:93/369 - (25%)
Similarity:150/369 - (40%) Gaps:98/369 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   349 SGAQRTKPGNGNKSA---------SNGKSQASPPLRIEDVVAARSTNGEEPA-KCDNDVRELQRA 403
            |..:||:.|....:|         |.|.|..|..||      .||:..::.| .||       .|
plant    53 SSGERTEFGLQLSAALTQLADLYSSEGLSLKSDELR------TRSSLIKQRALDCD-------LA 104

  Fly   404 SKEINRSNRRIMKQTFNSDVLEIPEKIETSATKAIPTSPQASATAK---PPVDSTTEDDDEEDED 465
            |   :||:..:..|:           :.:|..|:.|......|..|   ..|.|:.....:..:|
plant   105 S---SRSSGNVENQS-----------VASSGLKSDPNVSSFDADGKTEDSKVSSSNSAAHDSSDD 155

  Fly   466 DWEKMFDESGDCLDPKLLQELTESVGKCKIELPKMD-------YTVFHIKQQLLNEEEFP----- 518
            |||.:.|.....|.|  ::||.| :.|..:|.||:.       .|..:....:.::.:|.     
plant   156 DWEALADVEPSKLLP--VEELPE-ISKLSVEEPKVQGPKRRGRGTFTYKSDAMYSDRDFSESRFD 217

  Fly   519 --------------------------HVLEVSNFPVEFKTPDLLMLFAQYRGSGFDIKWVDDTHA 557
                                      |||.::.|....:|.:|..||..::.|||.|:||:||.|
plant   218 DDSEDNDLSRESEKTDESLKSKYGTRHVLVLAGFSPSLRTTELEKLFKDFKDSGFIIRWVNDTTA 282

  Fly   558 LAVFSSSRIAAEVLTMGHPFVKLKPLAEATLESRLKAKKAGAVS---MQPYRQRPETCTALARRL 619
            ||||.:...|.|..........::.|.:.  :|.|     |::|   ::|..|||:|....|:||
plant   283 LAVFKTPSAALEACKHVQCSFTIRVLDDN--DSLL-----GSISGKDLEPPSQRPKTSAKTAQRL 340

  Fly   620 VSGALGVKLPTA---PQERENERRVLREAKERKLLAAKQRDEVW 660
            ::.::|:|||.:   .:||:.|    ...|.|.:...|||::.|
plant   341 IAHSMGLKLPASGFGSKERDQE----AARKNRIVSRQKQREDAW 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2162NP_001163332.2 R3H 6..70 CDD:469711
RRM_SF 519..583 CDD:473069 23/63 (37%)
AT5G22120NP_680198.1 RRM_SF 243..>297 CDD:473069 23/53 (43%)
Blue background indicates that the domain is not in the aligned region.

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