DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or63a and Or1a

DIOPT Version :10

Sequence 1:NP_523895.2 Gene:Or63a / 38354 FlyBaseID:FBgn0035382 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_525029.2 Gene:Or1a / 30978 FlyBaseID:FBgn0029521 Length:392 Species:Drosophila melanogaster


Alignment Length:408 Identity:80/408 - (19%)
Similarity:154/408 - (37%) Gaps:65/408 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 LDPSRCGQVLR--IWTIVLSVSSLASLYGHWQMLARYIHDIPRIGETAGTALQFLTSIAKMWYFL 95
            |.|.:.|.|||  :...::.:::...|......:.:..:.|....|.....||.::|:.||..||
  Fly    26 LQPDKKGNVLRSPLLYCIMCLTTSFELCTVCAFMVQNRNQIVLCSEALMHGLQMVSSLLKMAIFL 90

  Fly    96 FAHRQIYELLRKARCHELLQKCELFERMSDLPVIKEIRQQV--ESTMNRYWAS--TRRQILIYLY 156
                        |:.|:|:.            :|::|:...  |..:...|.|  .|.|::..:|
  Fly    91 ------------AKSHDLVD------------LIQQIQSPFTEEDLVGTEWRSQNQRGQLMAAIY 131

  Fly   157 SCICITT--NYFINSFVINLYRYFT----KPKGSYDIMLPLPSLYPAWEHKGLEFPYYHIQMYLE 215
            ..:|..|  ::.:....:.:.:|.:    .|..|:.::||.....|            |:  |..
  Fly   132 FMMCAGTSVSFLLMPVALTMLKYHSTGEFAPVSSFRVLLPYDVTQP------------HV--YAM 182

  Fly   216 TCSL--YICGMCAVSFDGVFIVL--CLHSVGLM-RSLNQMVEQATSELVPPDRRVEYLRCCIYQY 275
            .|.|  ::......|..||..:.  |...|.|. |.|.|.:::..| ...|.|....|.....::
  Fly   183 DCCLMVFVLSFFCCSTTGVDTLYGWCALGVSLQYRRLGQQLKRIPS-CFNPSRSDFGLSGIFVEH 246

  Fly   276 QRVANFATEVNNCFRHITFTQFLL--SLFNWGLALFQMSVGLGNNSSITMIRMTMYLVAAGYQIV 338
            .|:.......|..|..|.|.:.::  .|:...:..:.|.   ..|.:...:.....:|..  |:.
  Fly   247 ARLLKIVQHFNYSFMEIAFVEVVIICGLYCSVICQYIMP---HTNQNFAFLGFFSLVVTT--QLC 306

  Fly   339 VYCYNGQRFATASEEIANAFYQV-RWYGESREFRHLIRMMLMRTNRGFRLDVSWFMQMSLPTLMA 402
            :|.:..::....:|..:...|:| .|.....:.|.|....:.|..|...|. ::|.::..|.|:.
  Fly   307 IYLFGAEQVRLEAERFSRLLYEVIPWQNLPPKHRKLFLFPIERAQRETVLG-AYFFELGRPLLVW 370

  Fly   403 MVRTSGQYFLLLQNVNQK 420
            :.||:|.:..|:..:..|
  Fly   371 IFRTAGSFTTLMNALYAK 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or63aNP_523895.2 7tm_6 76..408 CDD:251636 69/349 (20%)
Or1aNP_525029.2 7tm_6 79..376 CDD:251636 66/341 (19%)

Return to query results.
Submit another query.