DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mrtf and mrtfba

DIOPT Version :10

Sequence 1:NP_001137879.3 Gene:Mrtf / 38338 FlyBaseID:FBgn0052296 Length:1788 Species:Drosophila melanogaster
Sequence 2:XP_073774515.1 Gene:mrtfba / 793956 ZFINID:ZDB-GENE-130531-36 Length:1000 Species:Danio rerio


Alignment Length:1316 Identity:314/1316 - (23%)
Similarity:486/1316 - (36%) Gaps:470/1316 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   345 LKVKLMVRRPHSQLVEQGIIPSLKTSPAIHEQCKQLERAKTSDLLKAKIQQRPNREDLERLHILE 409
            |:::|..||...|||||||:|.||:..|.|||.:.||||:|.:.||.||:.||.|.:|.|:|||:
Zfish    61 LQLRLQQRRTREQLVEQGIMPPLKSPAAFHEQIRSLERARTENFLKHKIRSRPERAELVRMHILQ 125

  Fly   410 EDECHIDPSLAEKQRMLKKARLADQLNSQIQHRPGPLELIKKNILHTEKPIEKIVKEGLVSFKAT 474
            |...  :|||...|..||:|||||.||.:|..||||:||::||||..:..:::.:.:|.:.:..|
Zfish   126 ETLA--EPSLQATQLRLKRARLADDLNEKIAQRPGPMELVEKNILPVDSSLKEAIIDGQMQYPRT 188

  Fly   475 SEGLLTRPQHPHSYVTFDDDSLSSESDTRQTPPRLDEAMVATSSSPTDVLQAAAASAGIVTMALT 539
            .|.|:            |:||..:.|..:   |...|:            |.:|||         
Zfish   189 LEDLI------------DEDSGDAFSPEQ---PASQES------------QGSAAS--------- 217

  Fly   540 MPTAGQLVVTSPQILPQQQQPKAIVVPAPVPPPPPPPPPLPMASIIKVKQETANLYEELCQSVTG 604
                                      ||.|                :..:||:.|...|.|    
Zfish   218 --------------------------PAEV----------------RTMEETSPLPNNLLQ---- 236

  Fly   605 TTASPVNHLYSPCSLASSTSTLSPLSSI---ASPPPP-PMTTTRLHLAPVS-----VKSDAP--- 657
                     :.|....:||..|.|.|::   .|||.| |...|   :|||.     ||...|   
Zfish   237 ---------HFPAVTTTSTDFLKPFSTVEQSVSPPAPIPQLVT---VAPVKSGPTLVKQSQPKLP 289

  Fly   658 -GKDKNRKKSKSKPVSKARTIKFHEYKGPPSAAGQKQDQTQ-PEETSYQLMLEQQNCLLKFLENL 720
             .|.:::|..:|||  :.:.:|:|:|. ||.   |||:..| |.::||..:|:||...|: |:.|
Zfish   290 GDKSRSKKSKESKP--RVKKLKYHQYI-PPD---QKQEPDQAPMDSSYARLLQQQQLFLQ-LQIL 347

  Fly   721 NKN-------QSIIPAPSAPGVMLPAAPGATNNSITVTTKTVPALASQSAPAPAPISLPNTISIT 778
            ::.       |:|:|||..|.:      ...|:|.||....     :.|.||...:|||.|    
Zfish   348 SQQQQQHYNYQTILPAPLKPVI------EGQNSSATVAINN-----ANSLPASIVVSLPTT---- 397

  Fly   779 SSSGGAPLNFGDATMLTPTPAATPTPPTLSLIAAPQQQLQLHQQHQQLHQPTPVQHPPPLPSPAL 843
                                                               |||:     |:..|
Zfish   398 ---------------------------------------------------TPVR-----PNSTL 406

  Fly   844 S-VSSSIPPSPATSYAESTTSSITDLARLEKMKVSDLKQHLKRRNLPVSGPKPHLIERLKPYLPL 907
            | ..:.|.|                 |.||:|||::||..||.|.|||||.|..|||||||:   
Zfish   407 SNRKAGILP-----------------ANLEEMKVAELKMELKLRGLPVSGTKTDLIERLKPF--- 451

  Fly   908 EPLDSNVTPAPTSNNSNTTPEVITISDAMDTSN-----------CGLLEQPPPVTMLVSDASMEH 961
              .::.:|.||  |||:|.|:.......|:.|:           ...|...|||:...|:. :..
Zfish   452 --QENPITTAP--NNSSTGPKTQPCGTPMEVSSTTTTISPIQLASTTLSSTPPVSPSSSEL-LSR 511

  Fly   962 EQMDVVQQQMDNTHPMTLQTILPPQPQTATIILTNEELLREQQRKIDELQRQLQRSQQELQKIRQ 1026
            |.|. |:.|.:..:...::....|:.|        :..|.|::|:|:||.|:|::.|:.::::: 
Zfish   512 EDMS-VEGQAETQNRCLIKANAVPEEQ--------DRRLHEKERQIEELLRKLEQEQKLVEELK- 566

  Fly  1027 RQQQQQHQQQQTVTAQVVNALPSQQITLITTTSNGPQQTLTVMPQQVEKNFPAKVTVKATGGNSN 1091
                                                      |..:|||......:|:      |
Zfish   567 ------------------------------------------MQLEVEKRSGVVPSVE------N 583

  Fly  1092 HKVNGLQQQGSAAKKPASSNSNSNSNISSSNPPPINQKMVVKQQLEAKIQKQKAAAAAAAQQQQQ 1156
            :.|:|              .|...:::.:.|..|.|          .|:...........::...
Zfish   584 NNVSG--------------PSIMLASVKAENTVPPN----------CKLNSHTTTTLVKLEEAHP 624

  Fly  1157 QQQQQQQQQQQQALQQQQQQQQQQQQVRLLTQK--TQTVF-IPFNNNN---HINNASAKTTTKKS 1215
            .|......:|.....|...|...|.|..|.||.  ||.:. :|..||.   .:.||:.|......
Zfish   625 NQVTTAPLRQFIISHQGVPQVIGQPQTLLTTQHGGTQILLPMPLANNTTTIQLPNANVKLQPVLQ 689

  Fly  1216 NVPANNTNTTTATMMQAAKPAAVAAAAASPGNQH---HNNLGLLWNEGNQTILLLGLND----QH 1273
            .|....|.......:|:.|       |.||.:|.   ||::       .|| |.:|..:    ||
Zfish   690 AVSTPGTGLIQTPQLQSTK-------AESPTSQQLLSHNHI-------VQT-LSVGTTERSGFQH 739

  Fly  1274 MTAHTLGNISL----TATTTTTAAPPAATPVAASTIAPPKKILNGHQRTNSLPSIVFPIETKSII 1334
            .|:.....:.:    .:::......|..:|:       |..::||                    
Zfish   740 STSENQAGLEIPQCFLSSSPENRTSPQTSPI-------PSSLING-------------------- 777

  Fly  1335 TQQQLQQLQQQQQQQQQFQPV--QQPKQQQLNQVDIKPAPAPPPQYEEATKQLAASKAAALNGLL 1397
                  ||.:....||  .||  |.||.::            ||:||||.||..:          
Zfish   778 ------QLNKASFIQQ--CPVFNQAPKNRE------------PPRYEEAVKQTRS---------- 812

  Fly  1398 PLVKIKEEPVQSPAPSAAPLPQTAPLCKRKTASIKSEQVSDVLDILIKQGELPESAALEPITPLT 1462
                     :|:|..|             :.:::.|:|:.|:.||||:.||:...:..:|..|  
Zfish   813 ---------LQNPTIS-------------EFSTVTSQQMDDLFDILIESGEITPFSQQDPSVP-- 853

  Fly  1463 PLPELSMFNGATPTTAAGGASIVPLVPKLETPVTPVQNLDVAMDTNVQHVGFASNQAPNHVFIES 1527
                     ...|.||:  .:.:|:...|..|...||                 ...|..:.:|.
Zfish   854 ---------KMMPVTAS--ITTLPISTALSRPPAQVQ-----------------MAPPPTLMVEP 890

  Fly  1528 IDMASPLQTDS--SAI-------DAESVAKTLDIFLE-QHHATPPPSTPPKSCHSG-SEKPNSPD 1581
            :...:.|.:|:  .|:       |.|...:||.:..| |:.....|::|..:...| |:.|....
Zfish   891 LPSLASLDSDNQLEALLEGTLVGDTEPEQRTLCLLEELQNQMLDQPNSPMDTSELGFSDPPAQSS 955

  Fly  1582 AKLNH--FDEYELLEL 1595
            ..|..  .|..|.|:|
Zfish   956 FSLQDTGLDNMEWLDL 971

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MrtfNP_001137879.3 RPEL 387..412 CDD:128947 13/24 (54%)
RPEL 433..458 CDD:128947 14/24 (58%)
SAP 871..905 CDD:460424 23/33 (70%)
mrtfbaXP_073774515.1 None

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