DRSC/TRiP Functional Genomics Resources

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Protein Alignment ProRS-m and eprs1

DIOPT Version :10

Sequence 1:NP_647737.1 Gene:ProRS-m / 38331 FlyBaseID:FBgn0027082 Length:458 Species:Drosophila melanogaster
Sequence 2:XP_009291485.1 Gene:eprs1 / 562037 ZFINID:ZDB-GENE-030131-638 Length:1690 Species:Danio rerio


Alignment Length:444 Identity:89/444 - (20%)
Similarity:153/444 - (34%) Gaps:94/444 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 NGTYQIMPMAQRSVDKCIDLVQSNMQQAGGQKITLPILTPTGLWKKTGRLDGDISEFYMVRDRSG 108
            :|.|.:.|.:....|...:.....:::.|.:....|:.......:|......|.:.......|||
Zfish  1222 SGCYVLRPWSYSIWDAIKEFFDREIKKLGVENCYFPMFVSQAALEKEKTHIADFAPEVAWVTRSG 1286

  Fly   109 KQFLMSPTHEEAVTAMLATTSPI----------SYRQLPLRLFQIGPKFRDELKTRFGLMRAKEF 163
            |..|..|      .|:..|:..:          |:|.||::|.|.....|.|.|.....:|.:||
Zfish  1287 KTELAEP------IAVRPTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHPQPFLRTREF 1345

  Fly   164 LMKDMYSFDVSEETAMETYTLVNAAYDRLFKQL-EVPFVKVNAATGIMGGSVSHEYHYVSPVGED 227
            |.::.::...::|.|.|....:...|.|::::| .:|.||        |.....|          
Zfish  1346 LWQEGHTAFATKEEATEEVLQILDLYARVYEELMAIPVVK--------GRKTEKE---------- 1392

  Fly   228 NLLQCSSCGFAGNSEVVKAPASCPSCNSSDLKEVRGVEVAHTFLLGDKYSKPLGATFLN--TTGK 290
                    .|||........|..    |:..:.::|....|   ||..:|:.....|.:  ..|:
Zfish  1393 --------KFAGGDYTTTVEAFI----SASGRAIQGATSHH---LGQNFSRMFEIVFEDPKKPGE 1442

  Fly   291 PQSLVMGCYGIGITRVIAAALEVLSSDHELRWPKLLAPYDVCL---IGPKQGSKEQPEAEVIENE 352
            .|......:|| .||.|.    ||:..|......:|.|...||   |.|...:...|||   |.:
Zfish  1443 KQLAYQNSWGI-TTRTIG----VLTMVHGDNMGLVLPPRVACLQVIIIPCGITATLPEA---EKD 1499

  Fly   353 LLL-------------------------NVGEICGHQEL------LHDDRKELTIGKRLLEAKRL 386
            |||                         :.|....|.||      .....|:|..|:.:...:..
Zfish  1500 LLLDQCSKYLSRLQKADIRVKADLRDNYSPGWKFNHWELKGVPIRFEVGPKDLKQGQFVAVRRDT 1564

  Fly   387 GHPLTIVVGAKSARLDSPKLEVHTSKGETYELDFSETLKLVAEHSQHKKSLERG 440
            |..:|:.......::.:...|:..:..:....|.::.:.:.....|.:|.|::|
Zfish  1565 GEKITVKEADAEKKIPNLLEEIQNNLFKRASDDLNKHMVVADTMEQFQKDLDQG 1618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ProRS-mNP_647737.1 ProRS_core_prok 24..313 CDD:238402 58/281 (21%)
ProRS_anticodon_short 328..428 CDD:238438 23/133 (17%)
eprs1XP_009291485.1 PLN02907 1..717 CDD:215492
WEPRS_RNA 762..811 CDD:238473
WEPRS_RNA 841..889 CDD:238473
WEPRS_RNA 911..960 CDD:238473
WEPRS_RNA 996..1045 CDD:238473
WEPRS_RNA 1080..1128 CDD:238473
proS_fam_I 1196..1690 CDD:273062 89/444 (20%)
Blue background indicates that the domain is not in the aligned region.

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