DRSC/TRiP Functional Genomics Resources

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Protein Alignment ProRS-m and mRpL39

DIOPT Version :10

Sequence 1:NP_647737.1 Gene:ProRS-m / 38331 FlyBaseID:FBgn0027082 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_524075.2 Gene:mRpL39 / 39627 FlyBaseID:FBgn0036462 Length:333 Species:Drosophila melanogaster


Alignment Length:174 Identity:42/174 - (24%)
Similarity:63/174 - (36%) Gaps:45/174 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 MYSFDVSEETAME------TYTLVNAAYDRLFK-----QLEVPFVKVNAATGIMGGSVSHEYHYV 221
            :.:|.|||...:.      ...::.||.:|.||     ||. .|...|    |..||..|     
  Fly   120 LLNFHVSEPHVVNKAFWRTCSFMLGAALNRAFKPEANLQLH-SFPGPN----IKSGSFVH----- 174

  Fly   222 SPVGEDNLLQCSSCGFAGNSEVVKAPASCPSCNSSDLKEVR---GVEVAHTFLLGDKY-SKPLGA 282
                 |.:||..:.. .|..|:....|......:.||:..|   ..::|.......|| |:.|.:
  Fly   175 -----DIVLQTQNWE-PGKEEMRALSAEMVKLAAQDLRIERLDVQQDLAQEMFKDSKYKSEQLPS 233

  Fly   283 TFLNTTGKPQSLVMGCYGIGITR-------------VIAAALEV 313
            ....|.|:.....:|.: |.|:|             ||:||.:|
  Fly   234 ISQQTNGRVTLYRLGDH-IDISRGPMVASTSFLGKCVISAAHKV 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ProRS-mNP_647737.1 ProRS_core_prok 24..313 CDD:238402 41/172 (24%)
ProRS_anticodon_short 328..428 CDD:238438
mRpL39NP_524075.2 PLN02908 31..>265 CDD:178496 37/161 (23%)
Blue background indicates that the domain is not in the aligned region.

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