DRSC/TRiP Functional Genomics Resources

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Protein Alignment ProRS-m and Pars2

DIOPT Version :9

Sequence 1:NP_647737.1 Gene:ProRS-m / 38331 FlyBaseID:FBgn0027082 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_001014086.2 Gene:Pars2 / 313429 RGDID:1305345 Length:480 Species:Rattus norvegicus


Alignment Length:440 Identity:188/440 - (42%)
Similarity:276/440 - (62%) Gaps:21/440 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KASRIFCPALITPKNAVVKQTEQLS----------RSQKLLTELGLVKSGSNGTYQIMPMAQRSV 57
            :..|:....:..|:|  :::.:.||          :||:|:.::||:...|.|.|.:||...|:|
  Rat    41 RGQRLVVSRMFQPQN--LREDQVLSLEGRASDLTCKSQRLMLQVGLILPASPGCYHLMPYTVRAV 103

  Fly    58 DKCIDLVQSNMQQAGGQKITLPILTPTGLWKKTGRLDGDISEFYMVRDRSGKQFLMSPTHEEAVT 122
            :|.:.::...||..|||||.:|.|:|..||:.|||.|....|...::||.||::.:.||||||||
  Rat   104 EKLVRVIDQEMQAIGGQKINMPSLSPAELWRATGRWDLMGRELLRLKDRHGKEYCLGPTHEEAVT 168

  Fly   123 AMLATTSPISYRQLPLRLFQIGPKFRDELKTRFGLMRAKEFLMKDMYSFDVSEETAMETYTLVNA 187
            |::|:...:||:||||.|:|:..|||||.:.||||:|.:||.|||||:||.|.|.|.|||:||..
  Rat   169 ALVASQKKLSYKQLPLLLYQVTRKFRDEPRPRFGLLRGREFYMKDMYTFDSSSEAAQETYSLVCD 233

  Fly   188 AYDRLFKQLEVPFVKVNAATGIMGGSVSHEYHYVSPVGEDNLLQCSSCGFAGNSEVVK-APASCP 251
            ||.|||.:|.:.::|..|..|.:||::|||:.....:|||.|:.|.||.|:.|:|:|. :...||
  Rat   234 AYCRLFDRLGLRWMKARADVGSIGGTMSHEFQLPVDIGEDRLVVCPSCHFSANTEIVDLSQKICP 298

  Fly   252 SCNSSDLKEVRGVEVAHTFLLGDKYSKPLGATFLNTTGKPQSLVMGCYGIGITRVIAAALEVLSS 316
            .| ...|.|.:|:||.|||.||.|||....|.|.|..|:.....|||||:|:||::|||:||||:
  Rat   299 DC-QGPLTETKGIEVGHTFYLGTKYSSIFNAHFTNAHGESLLAEMGCYGLGVTRILAAAIEVLST 362

  Fly   317 DHELRWPKLLAPYDVCLIGPKQGSKEQPEAEVIE---NELLLNVGEICGHQELLHDDRKELTIGK 378
            :..:|||.|||||.||:|.||:||||....|::|   :::...:.::.|  |:|.|||..||||.
  Rat   363 EDCIRWPSLLAPYQVCIIPPKKGSKEAAATEIVERLYDDVTEALPQLRG--EVLLDDRTHLTIGN 425

  Fly   379 RLLEAKRLGHPLTIVVGAKSARLDSPKLEVHT-SKGETYELDFSETLKLV 427
            ||.:|.:||:|. :::.:|.|..|....||.: :.||...|.....::|:
  Rat   426 RLKDANKLGYPF-VIIASKRALEDPAHFEVWSQNTGEVVFLTKEGVMELL 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ProRS-mNP_647737.1 PRK09194 3..422 CDD:236405 187/433 (43%)
ProRS_core_prok 24..313 CDD:238402 137/299 (46%)
ProRS_anticodon_short 328..428 CDD:238438 38/104 (37%)
Pars2NP_001014086.2 ProRS_core_prok 70..359 CDD:238402 135/289 (47%)
ProRS_anticodon_short 374..475 CDD:238438 38/104 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343901
Domainoid 1 1.000 218 1.000 Domainoid score I2588
eggNOG 1 0.900 - - E1_COG0442
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5830
Inparanoid 1 1.050 349 1.000 Inparanoid score I2214
OMA 1 1.010 - - QHG52122
OrthoDB 1 1.010 - - D307110at33208
OrthoFinder 1 1.000 - - FOG0004664
OrthoInspector 1 1.000 - - oto97302
orthoMCL 1 0.900 - - OOG6_103003
Panther 1 1.100 - - LDO PTHR42753
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3277
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.810

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