DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pxn and duox

DIOPT Version :10

Sequence 1:NP_523891.2 Gene:Pxn / 38326 FlyBaseID:FBgn0011828 Length:1527 Species:Drosophila melanogaster
Sequence 2:XP_073799394.1 Gene:duox / 565097 ZFINID:ZDB-GENE-091117-14 Length:1537 Species:Danio rerio


Alignment Length:744 Identity:188/744 - (25%)
Similarity:313/744 - (42%) Gaps:118/744 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   776 RYRSIDGTCNNLQHPTWGASLTAFRRLAPPIYENGFSMPVGWTKGMLYSGHAK---PSARLVSTS 837
            ||   ||..|||.....||:..:..||.|..|.:|           :|....:   |:.|.:|| 
Zfish    33 RY---DGWYNNLADHDRGAADASLVRLYPAQYMDG-----------VYLARQEPHLPNPRRIST- 82

  Fly   838 LVATKEITPDARITHMVMQWGQFLDHDLDHAIPSVSSES-----WDGIDCKKSCEMAPPCYPIEV 897
                         |.|..|.|.     |.|...||.|.:     |..|...:.....|....|:|
Zfish    83 -------------TAMSGQSGL-----LSHKNRSVLSVAFGYHVWSEISESRRAGCPPEFMHIKV 129

  Fly   898 PPNDPRVRNRRCIDVVRSSAIC------GSGMTSLFFDSVQHREQINQLTSYIDASQVYGYSTAF 956
            ..:||       :.|..||...      ....||........|.|:|.:|::||.|.:||.|:::
Zfish   130 QKDDP-------VFVSNSSQPVLLQFQRADWDTSTGKSPNNPRTQVNHVTAWIDGSSIYGSSSSW 187

  Fly   957 AQELRNLTSQEGLLRVGVHFPRQKD--MLPFAAPQDGMDCRRNLDENTMSCFVSGDIRVNEQVGL 1019
            :..||..:............||:..  .|.:::|    |.....|..:...:..|:...||.:..
Zfish   188 SDALREFSGGRLSSSSSRDMPRRSSNGYLMWSSP----DPSSGPDSGSQELYEFGNAWANENIFS 248

  Fly  1020 LAMHTIWMREHNRIASKLKQINSHWDGDTLYQEARKIVGAQMQHITFKQWLPLIIGESGMEMMGE 1084
            :....||.|.||.:||||.:.:..|..:.|:|.|||.|.|..|:|.|.:|||..:|..    :..
Zfish   249 VTEGIIWFRYHNYLASKLHKEHPSWSDEELFQHARKRVIATFQNIAFYEWLPAFLGTH----VTS 309

  Fly  1085 YQGYNPQLNPSIANEFATAALRFGHTIINPILHRLNET--FQPIPQGH------LLLHKAFFAPW 1141
            |.||...::|.|:.||..||:|||.|:..|.:::.|.|  ::.:....      |.|...|   |
Zfish   310 YPGYQKYVDPGISVEFEAAAVRFGLTLAPPGVYKRNRTCHYRSVVNDDASKSPGLRLCNTF---W 371

  Fly  1142 -----RLAYEGGVDPLMRGFLAVPAKLKTPDQNLNTELTEKLFQTAHAVALDLAAINIQRGRDHG 1201
                 .|.....||.|:.|..:..|:.:  |..:..:|.:.::........|..|:.||||||.|
Zfish   372 NRNNPHLQSSLDVDELIMGMASQIAERE--DNIIVEDLRDYMYGPLRFSRSDAVALTIQRGRDFG 434

  Fly  1202 MPGYNVYRKLCNLTVAQDFEDLAGEISSAEIRQKMKELYGHP-DNVDVWLGGILEDQVEGGKVGP 1265
            :|.||..|:..::.....|||:..::...::.:::.:||.:. ..:::::||:||.| ||  .||
Zfish   435 LPSYNQIREALSMAPVNSFEDINPKLKDTKLLKELADLYENDISRLELFVGGLLETQ-EG--PGP 496

  Fly  1266 LFQCLLVEQFRRLRDGDRLYYENP--GVFSPEQLTQIKQANFGRVLCDVGDNFDQVTENVFILAK 1328
            :|..::::||.|:|:.||.::||.  |:|:.|::..|:...|..||.||             .:.
Zfish   497 VFSTIILDQFERIRNADRFWFENKQNGLFTEEEIKAIRNTTFHDVLLDV-------------TSA 548

  Fly  1329 HQGGYKKCEDIIGINLYLWQECGRCNSPPAIFDSYIPQTYTKR-SNRQKRDLGKENDEVATAESY 1392
            .:|..::       :::.|:....|..|..|..|.: |..||. |.....|..|....|.....:
Zfish   549 EKGDIQR-------SVFFWKNGDPCPQPQPIRASDL-QPCTKAFSMSYFDDSSKVGFGVTVVVLF 605

  Fly  1393 DSPLESLYDVNEERVSGLEEL-IGSFQKELKKLHKKLRKLEDSCNSADSEPVAQVVQLAAAPPQL 1456
            ..|:.|...|:....|.:.:: ...|::..:|.....:..|.:..:..||.:..    ..||.|:
Zfish   606 LFPVVSSLTVSYIVASAVAQVRTARFKRFQQKRSGSTKHKEPAHGTTASEWLGH----NTAPRQV 666

  Fly  1457 V---SKPKRSHCVDDKGTTRLNNEVWSPD 1482
            .   |:.|.....|:.|:...::.:.:.|
Zfish   667 TLAFSEKKVFQTFDENGSPLSSHSLGNQD 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxnNP_523891.2 leucine-rich repeat 54..77 CDD:275380
LRR <55..>184 CDD:443914
leucine-rich repeat 78..101 CDD:275380
leucine-rich repeat 102..125 CDD:275380
leucine-rich repeat 126..149 CDD:275380
leucine-rich repeat 150..173 CDD:275380
Ig_3 235..311 CDD:464046
Ig 366..450 CDD:472250
Ig strand B 384..388 CDD:409544
Ig strand C 397..401 CDD:409544
Ig strand E 420..424 CDD:409544
Ig strand F 434..439 CDD:409544
Ig strand G 447..450 CDD:409544
Ig_3 458..533 CDD:464046
Ig 553..644 CDD:472250
Ig strand B 570..574 CDD:409353
Ig strand C 584..588 CDD:409353
Ig strand E 610..614 CDD:409353
Ig strand F 624..629 CDD:409353
Ig strand G 638..641 CDD:409353
peroxidasin_like 898..1338 CDD:188658 126/463 (27%)
VWC 1465..1523 CDD:278520 3/18 (17%)
duoxXP_073799394.1 None
Blue background indicates that the domain is not in the aligned region.

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