DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pxn and nox1

DIOPT Version :10

Sequence 1:NP_523891.2 Gene:Pxn / 38326 FlyBaseID:FBgn0011828 Length:1527 Species:Drosophila melanogaster
Sequence 2:NP_001095857.2 Gene:nox1 / 555604 ZFINID:ZDB-GENE-070404-1 Length:564 Species:Danio rerio


Alignment Length:436 Identity:89/436 - (20%)
Similarity:137/436 - (31%) Gaps:160/436 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 MLLMLQLL-GLLLLLAGGVQSVYCPAGCTCLERTVR--------------CIRAKLSAVPKLPQD 53
            ||::|.:. .||.||.|..         .|..||||              .:.|.::||      
Zfish    65 MLILLPVCRNLLSLLRGSF---------VCCGRTVRKQLDKNLTFHKLVAYMIALMTAV------ 114

  Fly    54 TQTLDLRFNHIEELPANAFSGLAQLTTLFLNDNELAY----LQDGALNGLTALRFVYLNNNRLSR 114
             .|:...||  .|..:|:..|         .|.:||:    |||.:          .||...|:.
Zfish   115 -HTIAHLFN--AERYSNSLEG---------EDGDLAFELSLLQDSS----------ELNTTYLNP 157

  Fly   115 LPATIFQRMPRLEAIFLENNDIWQLPAGLFDNLPRLNRLIMYNNKLTQLPVDGFNRLNNLKRLRL 179
            .|:.....|     ||     ::...|||...:..|..::|..:.:..:....|.          
Zfish   158 FPSNSTTPM-----IF-----VFTSIAGLTGVVITLALILMITSSMEVIRRSYFE---------- 202

  Fly   180 DGNAIDCNCGVYSLWRRWHLDV----------QRQLVSISLTCAAPQMLQNQGFSSLGEHHF--- 231
                        ..|...||.:          ..::|...:|...|   .|..|......::   
Zfish   203 ------------VFWYTHHLFIVFFAGLVFHGAGRVVRGQVTTDPP---HNNSFCEDQPDNWGKI 252

  Fly   232 -KCAKPQFL-VAPQDAQVAAGEQVELSCEVTGLPRPQITWMHNTQELGLEEQAQAEILPSGSL-- 292
             :|..|||. .:||......|..:...||      ..:.::...|.:   ...:..|.||..|  
Zfish   253 PECPIPQFAGGSPQTWMYVIGPMIIYICE------RLLRFIRYMQPV---TYRKIVIRPSKVLEL 308

  Fly   293 -LIRSADTSDMGIY---QCIARNEMG----ALRSQP-------------------VRLVVN---G 327
             |::...:.|:|.|   .|.|.:::.    .|.|.|                   :::|.|   |
Zfish   309 QLVKPGFSMDVGQYVFLNCPAISQLEWHPFTLTSAPEEDFFSVHIRSVGDWTEKLLKMVENLPEG 373

  Fly   328 GNHP---LDSPIDARSNQVW-------ADAGTPMHGATPLPSPLPS 363
            |..|   :|.|....|..|:       ..||.   |.||..|.|.|
Zfish   374 GQGPKMGVDGPFGTASEDVFHYEVSMLVGAGI---GVTPFASILKS 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxnNP_523891.2 leucine-rich repeat 54..77 CDD:275380 6/22 (27%)
LRR <55..>184 CDD:443914 25/132 (19%)
leucine-rich repeat 78..101 CDD:275380 6/26 (23%)
leucine-rich repeat 102..125 CDD:275380 5/22 (23%)
leucine-rich repeat 126..149 CDD:275380 5/22 (23%)
leucine-rich repeat 150..173 CDD:275380 3/22 (14%)
Ig_3 235..311 CDD:464046 19/82 (23%)
Ig 366..450 CDD:472250
Ig strand B 384..388 CDD:409544
Ig strand C 397..401 CDD:409544
Ig strand E 420..424 CDD:409544
Ig strand F 434..439 CDD:409544
Ig strand G 447..450 CDD:409544
Ig_3 458..533 CDD:464046
Ig 553..644 CDD:472250
Ig strand B 570..574 CDD:409353
Ig strand C 584..588 CDD:409353
Ig strand E 610..614 CDD:409353
Ig strand F 624..629 CDD:409353
Ig strand G 638..641 CDD:409353
peroxidasin_like 898..1338 CDD:188658
VWC 1465..1523 CDD:278520
nox1NP_001095857.2 None
Blue background indicates that the domain is not in the aligned region.

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