DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pxn and LOC3290775

DIOPT Version :10

Sequence 1:NP_523891.2 Gene:Pxn / 38326 FlyBaseID:FBgn0011828 Length:1527 Species:Drosophila melanogaster
Sequence 2:XP_563016.4 Gene:LOC3290775 / 3290775 VectorBaseID:AGAMI1_013486 Length:698 Species:Anopheles gambiae


Alignment Length:51 Identity:12/51 - (23%)
Similarity:22/51 - (43%) Gaps:18/51 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   483 KRKKKAGQQSISTDKSLN---------LHLMKDMR---------LANPKCL 515
            :.|||:.:.:..|:::..         ||...|::         |||.||:
Mosquito     3 ENKKKSRKTANKTNETSEGQKKKIIELLHEYNDLKDATQRVLEALANLKCV 53

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxnNP_523891.2 leucine-rich repeat 54..77 CDD:275380
LRR <55..>184 CDD:443914
leucine-rich repeat 78..101 CDD:275380
leucine-rich repeat 102..125 CDD:275380
leucine-rich repeat 126..149 CDD:275380
leucine-rich repeat 150..173 CDD:275380
Ig_3 235..311 CDD:464046
Ig 366..450 CDD:472250
Ig strand B 384..388 CDD:409544
Ig strand C 397..401 CDD:409544
Ig strand E 420..424 CDD:409544
Ig strand F 434..439 CDD:409544
Ig strand G 447..450 CDD:409544
Ig_3 458..533 CDD:464046 12/51 (24%)
Ig 553..644 CDD:472250
Ig strand B 570..574 CDD:409353
Ig strand C 584..588 CDD:409353
Ig strand E 610..614 CDD:409353
Ig strand F 624..629 CDD:409353
Ig strand G 638..641 CDD:409353
peroxidasin_like 898..1338 CDD:188658
VWC 1465..1523 CDD:278520
LOC3290775XP_563016.4 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.