DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pxn and ptgs2a

DIOPT Version :10

Sequence 1:NP_523891.2 Gene:Pxn / 38326 FlyBaseID:FBgn0011828 Length:1527 Species:Drosophila melanogaster
Sequence 2:NP_705943.1 Gene:ptgs2a / 246227 ZFINID:ZDB-GENE-020530-2 Length:601 Species:Danio rerio


Alignment Length:604 Identity:121/604 - (20%)
Similarity:213/604 - (35%) Gaps:203/604 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   708 LARAAEIYERTLVNIRKHVQEGDNLTMKSEEYEFRDLLSREHLHLVAELSGCMEHREMPNCTDMC 772
            |::.|:.||   .:..:....|:|.|..       :||:|        :...::.|  ||   :.
Zfish    36 LSKGADAYE---CDCTRTGYYGENCTTP-------ELLTR--------IKSALKPR--PN---VV 77

  Fly   773 FH--SRYRSIDGTCNNLQH--------------------PTWGA-----------SLTAFRRLAP 804
            .|  :.|:||....|::.:                    ||:.|           :|:.:.|...
Zfish    78 HHILTHYKSIWDIINSISYLRDGIMRYILLSRSHLVESPPTYNADYGYKSWEAYSNLSYYTRTLA 142

  Fly   805 PIYENGFSMPVGWTKGMLYSGHAKPSARLVSTSLVATKEITPDARITHMVMQWGQFLDHDLDHAI 869
            |:.:|   .|   |..:       |:|:.|...::..|:..||.:.:.::..:  |..|      
Zfish   143 PLPQN---CP---TPDL-------PNAKQVVEQVLLRKQFIPDPQRSSLMFAF--FAQH------ 186

  Fly   870 PSVSSESWDGIDCKKSCEMAPPCYPIEVPPNDPRVRNRRCIDVVRSSAICGSGMTSLFFDSVQHR 934
               .|..:...|.||.     |.:                      :...|.|            
Zfish   187 ---FSHQFFKSDFKKG-----PAF----------------------TKALGHG------------ 209

  Fly   935 EQINQLTSYIDASQVYGYSTAFAQELRNLTSQEGLLRV-----GVHFPRQKDMLPFAAPQDGMDC 994
                     :|...:||.:.....:||  ..::|.|:.     .|:.|..||:      |..|..
Zfish   210 ---------VDLGHIYGETLEVQHKLR--LFKDGKLKYQVVDGEVYPPLVKDV------QVEMHY 257

  Fly   995 RRNLDENTMSCFVSGDIRVNEQVGLLAMHTIWMREHNRIASKLKQINSHWDGDTLYQEARKIVGA 1059
            ..::.|...  |..|........||:...|||:|||||:...:||.:..||.:.::|..|.|   
Zfish   258 PPHIPEEQK--FAVGHEAFGLVPGLMMYATIWLREHNRVCDIMKQEHPDWDDERIFQTTRLI--- 317

  Fly  1060 QMQHITFKQWLPLIIGESGMEMMGEY----QGYN------PQL--------NPSIANEFATAALR 1106
                         :|||:...::.:|    .|||      |:|        ...||.||.|  |.
Zfish   318 -------------LIGETIKIVIEDYVQHLSGYNFKLKFDPELIFSERFQYQNRIAAEFNT--LY 367

  Fly  1107 FGHTIINPILHRLNETFQPIPQGHLLLHKAFFAPWRLAYEGGVDPLMRGFLAVPAKLKTPDQNLN 1171
            ..|.:       |.:.||  .|..:..:..|.....:....|:..::..|....|...:..:||.
Zfish   368 HWHPL-------LPDNFQ--IQDQIYGYHQFVFNNSIVTTHGIRNMVDSFTKQTAGRVSGGRNLP 423

  Fly  1172 TELTEKLFQTAHAVALDLAAINIQRGRDHGMPGYNVYRKLCNLTVAQDFEDLAGEISSAEIRQKM 1236
                    .....||:.:    :::.|......:|.||:..|:.....||::.|:   .::..::
Zfish   424 --------PAVQGVAVKV----LEQTRQMRYQSFNAYRRRFNMKPYSSFEEMTGD---KDLAAQL 473

  Fly  1237 KELYGHPDNVDVWLGGILE 1255
            ||||||.|.|:::.|.::|
Zfish   474 KELYGHVDKVELYPGLLVE 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxnNP_523891.2 leucine-rich repeat 54..77 CDD:275380
LRR <55..>184 CDD:443914
leucine-rich repeat 78..101 CDD:275380
leucine-rich repeat 102..125 CDD:275380
leucine-rich repeat 126..149 CDD:275380
leucine-rich repeat 150..173 CDD:275380
Ig_3 235..311 CDD:464046
Ig 366..450 CDD:472250
Ig strand B 384..388 CDD:409544
Ig strand C 397..401 CDD:409544
Ig strand E 420..424 CDD:409544
Ig strand F 434..439 CDD:409544
Ig strand G 447..450 CDD:409544
Ig_3 458..533 CDD:464046
Ig 553..644 CDD:472250
Ig strand B 570..574 CDD:409353
Ig strand C 584..588 CDD:409353
Ig strand E 610..614 CDD:409353
Ig strand F 624..629 CDD:409353
Ig strand G 638..641 CDD:409353
peroxidasin_like 898..1338 CDD:188658 81/381 (21%)
VWC 1465..1523 CDD:278520
ptgs2aNP_705943.1 EGF_CA 25..58 CDD:238011 6/24 (25%)
prostaglandin_endoperoxide_synthase 78..559 CDD:188648 108/539 (20%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.