DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pxn and ptgs1

DIOPT Version :10

Sequence 1:NP_523891.2 Gene:Pxn / 38326 FlyBaseID:FBgn0011828 Length:1527 Species:Drosophila melanogaster
Sequence 2:XP_073805847.1 Gene:ptgs1 / 246226 ZFINID:ZDB-GENE-020530-1 Length:609 Species:Danio rerio


Alignment Length:563 Identity:122/563 - (21%)
Similarity:193/563 - (34%) Gaps:192/563 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   742 RDLLSREHLHLVAELSGCMEHREMPNCTDMCFHSRYRSIDGTCNNLQHPTWGA--SLTAFRRLAP 804
            ||.|.|:.|.:.|.|        :|  :...::|||          .:..|.|  ::|.:.|:.|
Zfish   121 RDWLMRKVLTVRANL--------IP--SPPTYNSRY----------DYLNWEAYSNITYYTRILP 165

  Fly   805 PIYENGFSMPVGWTKGMLYSGHAKPSARLVSTSLVATKEITPDARITHMVMQ-WGQFLDHDLDHA 868
            |: .|....|:| |||.:    ..|..:|:....:..:....|.:.|:::.. :.|...|...  
Zfish   166 PV-PNDCPTPMG-TKGKI----KLPDPKLLVEKFMLRRNFRLDPQGTNLMFAFFAQHFTHQFF-- 222

  Fly   869 IPSVSSESWDGIDCKKSCEMAPPCYPIEVPPNDPRVRNRRCIDVVRSSAICGSGMTSLFFDSVQH 933
                                              :..||           .|.|.|         
Zfish   223 ----------------------------------KTHNR-----------VGLGFT--------- 233

  Fly   934 REQINQLTSYIDASQVYGYSTAFAQELRNLTSQEGLLRVGV-----------HFPRQKDMLPFAA 987
                ..|...:||..:||.|.....|||  ..::|.|:..|           |...:....|...
Zfish   234 ----KGLGHGVDAGHIYGDSLDRQLELR--LHKDGKLKYQVLNGDIYPPTVRHAQVKMSYPPSVP 292

  Fly   988 PQDGMDCRRNLDENTMSCFVSGDIRVNEQV-----GLLAMHTIWMREHNRIASKLKQINSHWDGD 1047
            |:.                   .:.:.::|     ||....|:|:|||||:...|||.:..|..:
Zfish   293 PEQ-------------------QLAIGQEVFGLLPGLGMYATLWLREHNRVCEILKQEHPTWGDE 338

  Fly  1048 TLYQEARKIVGAQMQHITFKQWLPLIIGESGMEMMGEY----QGYNPQL--NPS----------- 1095
            .|:|.||.|                ||||:...::.||    .||..:|  :|:           
Zfish   339 QLFQTARLI----------------IIGETIRIVIEEYVQHLSGYRLKLHFDPTLLFNSQFQYQN 387

  Fly  1096 -IANEFATAALRFGHTIINPILH---RLNETFQPIPQGHLLLHKAFFAPWRLAYEGGVDPLMRGF 1156
             ||.||            |.:.|   .:.::|. |...|:...|..|....|.:. |::.|:..|
Zfish   388 RIAVEF------------NQLYHWHPLMPDSFY-IDGDHIQYSKFIFNTSILTHY-GLEKLVEAF 438

  Fly  1157 LAVPAKLKTPDQNLNTELTEKLFQTAHAVALDLAAINIQRGRDHGMPGYNVYRKLCNLTVAQDFE 1221
            ...||.......|:            |.|...:|...|...|:..:..:|.|||..||.....|.
Zfish   439 SIQPAGQIGGGHNI------------HPVVSGVAERVIVESRELRLQPFNEYRKRFNLKPYTSFA 491

  Fly  1222 DLAGEISSAEIRQKMKELYGHPDNVDVWLGGILEDQVEGGKVG 1264
            :|.||   .|:.::::|||||.|.::.:...:||....|...|
Zfish   492 ELTGE---QEMSKELEELYGHIDAMEFYPALLLEKTRPGAVFG 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxnNP_523891.2 leucine-rich repeat 54..77 CDD:275380
LRR <55..>184 CDD:443914
leucine-rich repeat 78..101 CDD:275380
leucine-rich repeat 102..125 CDD:275380
leucine-rich repeat 126..149 CDD:275380
leucine-rich repeat 150..173 CDD:275380
Ig_3 235..311 CDD:464046
Ig 366..450 CDD:472250
Ig strand B 384..388 CDD:409544
Ig strand C 397..401 CDD:409544
Ig strand E 420..424 CDD:409544
Ig strand F 434..439 CDD:409544
Ig strand G 447..450 CDD:409544
Ig_3 458..533 CDD:464046
Ig 553..644 CDD:472250
Ig strand B 570..574 CDD:409353
Ig strand C 584..588 CDD:409353
Ig strand E 610..614 CDD:409353
Ig strand F 624..629 CDD:409353
Ig strand G 638..641 CDD:409353
peroxidasin_like 898..1338 CDD:188658 93/404 (23%)
VWC 1465..1523 CDD:278520
ptgs1XP_073805847.1 None
Blue background indicates that the domain is not in the aligned region.

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