DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pxn and duox-2

DIOPT Version :10

Sequence 1:NP_523891.2 Gene:Pxn / 38326 FlyBaseID:FBgn0011828 Length:1527 Species:Drosophila melanogaster
Sequence 2:NP_490684.1 Gene:duox-2 / 186188 WormBaseID:WBGene00018771 Length:1503 Species:Caenorhabditis elegans


Alignment Length:684 Identity:188/684 - (27%)
Similarity:316/684 - (46%) Gaps:125/684 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   776 RYRSIDGTCNNLQHPTWGASLTAFRRLAPPIYENGFSMPVGWTKGMLYS-GHAKPSARLVSTSLV 839
            ||   ||..|||.:..||::.:...|.|...|.:|           :|| .::.||||.:|..|.
 Worm    40 RY---DGWYNNLANSEWGSAGSRLHRDARSYYSDG-----------VYSVNNSLPSARELSDILF 90

  Fly   840 ATKEITPDAR-ITHMVMQWGQFLDHDLDHAIPSVSSESWDGIDCKKSCEMAPPCYPIEVPPNDPR 903
            ..:...|:.| .|.::..:.|.:.:::..:         :|:.|...      ...|:||..| .
 Worm    91 KGESGIPNTRGCTTLLAFFSQVVAYEIMQS---------NGVSCPLE------TLKIQVPLCD-N 139

  Fly   904 VRNRRC-----IDVVRS--SAICGSGMTSLFFDSVQHREQINQLTSYIDASQVYGYSTAFAQELR 961
            |.:..|     |...|:  ....|:|:.|       .|||||:.||:||.|.:||.:..:...||
 Worm   140 VFDNECEGKTTIPFYRAKYDKATGNGLNS-------PREQINERTSWIDGSFIYGTTQPWVSALR 197

  Fly   962 NLTSQEGLLRVGV--HFPRQKDMLPF---AAPQDGMDCRRNLDENTMSCFVSGDIRVNEQVGLLA 1021
            :.  ::|.|..||  :.|.....:|.   |.||    ..|.:..:.:  |:.||.||||..|||:
 Worm   198 SF--KQGRLAEGVPGYPPLNNPHIPLNNPAPPQ----VHRLMSPDRL--FMLGDSRVNENPGLLS 254

  Fly  1022 MHTIWMREHNRIASKLKQINSHWDGDTLYQEARKIVGAQMQHITFKQWLPLIIGESGMEMMGEYQ 1086
            ...|..|.||..|:::.:.:..|..:.::|.||::|.|.||.|....::|.::||.  ..:..|.
 Worm   255 FGLILFRWHNYNANQIYREHPDWTDEQIFQAARRLVIASMQKIIAYDFVPGLLGED--VRLSNYT 317

  Fly  1087 GYNPQLNPSIANEFATAALRFGHTIINPIL---HRLNE-TFQPIPQGH--LLLHKAFFAPWRLAY 1145
            .|.|.:.|.|::.|..||.||.|:|:.|.:   .|.|: .|:....|:  |.|.:.::....:..
 Worm   318 KYMPHVPPGISHAFGAAAFRFPHSIVPPAMLLRKRGNKCEFRTEVGGYPALRLCQNWWNAQDIVK 382

  Fly  1146 EGGVDPLMRGFLAVPAKLKTPDQNLNTE-LTEKLFQTAHAVALDLAAINIQRGRDHGMPGYNVYR 1209
            |..||.::   |.:.:::...|.|:..| |.:.:|...|...||:.|.:|.||||:|:|.||..|
 Worm   383 EYSVDEII---LGMASQIAERDDNIVVEDLRDYIFGPMHFSRLDVVASSIMRGRDNGVPPYNELR 444

  Fly  1210 KLCNL------TVAQDFEDLAGEISSAEIRQKMKELYGHPDNV---DVWLGGILEDQVEGGKVGP 1265
            :...|      |:.:||.    :..:|:: :|:|||||  .|:   |.::||:|    |||:.||
 Worm   445 RTFGLAPKTWETMNEDFY----KKHTAKV-EKLKELYG--GNILYLDAYVGGML----EGGENGP 498

  Fly  1266 --LFQCLLVEQFRRLRDGDRLYYENP--GVFSPEQLTQIKQANFGRVL---CDVGDNFDQVTENV 1323
              :|:.::.:||.|:|||||.::||.  .:|:.|::..|.......::   .|:.:...|  ::|
 Worm   499 GEMFKEIIKDQFTRIRDGDRFWFENKLNRLFTDEEVQMIHSITLRDIIKATTDIDETMLQ--KDV 561

  Fly  1324 FILAK----------HQGGYKKCEDII-------GINLYLWQECGRCNSPPAIFDSYIPQTYTKR 1371
            |...:          :..|.:.|..:|       ....|::...|....|...:.  |.....:|
 Worm   562 FFFKEGDPCPQPFQVNTIGLEPCAPLIQSTYWDDNDTTYIYTLIGLACIPLICYS--IGHYMVER 624

  Fly  1372 SNRQKRDLGKEN--DEVATAESYDSPLESLYDVN 1403
            ..|    :|..:  |.:.|..|.:||..::|.||
 Worm   625 RIR----IGHNSACDSLTTDFSTESPKVNVYKVN 654

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxnNP_523891.2 leucine-rich repeat 54..77 CDD:275380
LRR <55..>184 CDD:443914
leucine-rich repeat 78..101 CDD:275380
leucine-rich repeat 102..125 CDD:275380
leucine-rich repeat 126..149 CDD:275380
leucine-rich repeat 150..173 CDD:275380
Ig_3 235..311 CDD:464046
Ig 366..450 CDD:472250
Ig strand B 384..388 CDD:409544
Ig strand C 397..401 CDD:409544
Ig strand E 420..424 CDD:409544
Ig strand F 434..439 CDD:409544
Ig strand G 447..450 CDD:409544
Ig_3 458..533 CDD:464046
Ig 553..644 CDD:472250
Ig strand B 570..574 CDD:409353
Ig strand C 584..588 CDD:409353
Ig strand E 610..614 CDD:409353
Ig strand F 624..629 CDD:409353
Ig strand G 638..641 CDD:409353
peroxidasin_like 898..1338 CDD:188658 143/484 (30%)
VWC 1465..1523 CDD:278520
duox-2NP_490684.1 dual_peroxidase_like 41..596 CDD:188652 172/617 (28%)
PTZ00183 <811..>903 CDD:185503
COG4097 989..1405 CDD:443273
NOX_Duox_like_FAD_NADP 1224..1408 CDD:99783
Blue background indicates that the domain is not in the aligned region.

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