DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pxn and pxn-2

DIOPT Version :10

Sequence 1:NP_523891.2 Gene:Pxn / 38326 FlyBaseID:FBgn0011828 Length:1527 Species:Drosophila melanogaster
Sequence 2:NP_509834.1 Gene:pxn-2 / 181288 WormBaseID:WBGene00004257 Length:1328 Species:Caenorhabditis elegans


Alignment Length:1523 Identity:497/1523 - (32%)
Similarity:740/1523 - (48%) Gaps:251/1523 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LLLAGGVQSVYCPAGCTCLERTVRCIRAKLSAVP-KLPQDTQTLDLRFNHIEELPANAFSGLAQL 78
            |||.|...|..||:.|.|....|.|....|:|:| .:|..|..|....|.:..|..:.|..|..|
 Worm     6 LLLIGISLSTACPSECRCAGLDVHCEGKNLTAIPGHIPIATTNLYFSNNLLNSLSKSNFQALPNL 70

  Fly    79 TTLFLNDNELAYLQDGALNGLTALRFVYLNNNRLSRLPATIFQRMPR-LEAIFLENNDIWQLPAG 142
            ..|.|::|.:..:::..|:....|:::.|:.|::..:|.  ....|. |.::.|.:|:|.:|...
 Worm    71 QYLDLSNNSIRDIEETLLDSFPGLKYLDLSWNKIRYVPK--LSTAPNALVSLNLVHNEISRLDND 133

  Fly   143 LFDNLPRLNRLIMYNNKLTQLPVDGFN--RLNNLKRLRLDGNAIDCNCGVY-------SLWRRWH 198
            |..:.|.:...::..|::..||.|.||  .:..||.:::.||...|:|.:.       ||:..  
 Worm   134 LVSHSPYMQTFLIQRNRIQSLPHDFFNSRMVPTLKTVKMAGNPWSCDCRMVNVKQFADSLFAH-- 196

  Fly   199 LDVQRQLVSISLTCAAPQMLQNQGFSSLGEHHFKCAKPQFLVAPQDAQVAAGEQVELSC---EVT 260
               ..|.:.|...|..|:.|:|..|.:|...:.:|.||::      ::...| ..::||   |:.
 Worm   197 ---SNQNIFIVGKCFFPKGLRNYVFRNLSIENLECEKPEY------SKTDDG-MFKMSCPNNEME 251

  Fly   261 GLPRPQITWMHNTQELGLEEQAQAEILPSGSLLIRSADTSDMGIYQCIARNEMGALRSQPVRLVV 325
            |.....| ::.|.:|  ....|.......||||.....|.:   |||....:..::..|. ::..
 Worm   252 GYHYDSI-FLENNKE--ARHTAHFARDKDGSLLSNGQFTRN---YQCAFYRQKQSIHMQK-KMQA 309

  Fly   326 NGGNHPLDSPIDARSNQVWADAGTPMHGATPLPSPLPSPPHFTHQ---PHDQIVALHGSGHVL-L 386
            :....|   ||...:.:....:.......|.....:.:.|....:   .|.|:......|..| |
 Worm   310 SSSTEP---PITTTTMEPMTTSTMDSMDTTESVVTMTTMPEIDTKIVFEHKQLDTTSRDGETLEL 371

  Fly   387 DCAASGWPQPDIQWFVNGRQLLQSTPSLQLQANGSLILLQP-NQLSAGTYRCEARNSLGSVQATA 450
            .|.|||.|.|.|.|....::|.:|... :|..|||::.:.| .....|.|.|.|.|...|.....
 Worm   372 KCEASGEPTPTITWLFEKQKLTESRKH-KLTKNGSVLKIFPFLNTDIGQYECVASNGEESKSHIF 435

  Fly   451 RIELK--ELPEILTAPQSQTIKLGKAFVLECDADGNPLPTIDWQLNGVPLPGNTPDLQLENENTE 513
            .:.||  |.|.|:.||......:|:...|.|:|.|.|:|.:.|...|:.:|.......:.:.|.|
 Worm   436 SVSLKESEQPVIIDAPMDTNATIGQQVTLRCNAKGFPVPDVVWLFEGIRIPRRNTRYTISDNNIE 500

  Fly   514 LVVGAARQEHAGVYRCTAHNENGETSVEATIKVERSQSPPQLAIEPSNLVAITGTTIELPCQADQ 578
            |.:....:..:||:.|.|.|..|.                  |:..:||:.              
 Worm   501 LTIEKVTRHDSGVFTCQAVNSVGS------------------AVATANLLV-------------- 533

  Fly   579 PEDGLQISWRHDGRLIDPNVQLAEKYQISGAGSLFVKNVTIPDGGRYECQLKNQFGRASASALVT 643
               |.:::.:.|..|.|..::...|                                        
 Worm   534 ---GAELTEKVDKLLDDSTIEKIAK---------------------------------------- 555

  Fly   644 IRNNVDLAPGDRYVRIAFAEAAKEIDLAINNTLDMLFSNRSDK-APPNYGELLRVFRFPTGEAR- 706
                               ||.::::.|:::|.|   ..|.|| ..||  :|.::|:|.....: 
 Worm   556 -------------------EAKQKVEKALSSTKD---QQRMDKIESPN--DLSKLFKFAINLKKV 596

  Fly   707 QLARAAEIYERTLVNIRKHVQEG--DNLTMKSEEYEFRDLLSREHLHLVAELSGCMEHREMPNCT 769
            .|.:|.||||.::..::.|:..|  ....|.|....:..:|...::..:.|.|||...:...:|.
 Worm   597 DLGKAREIYEESIRLVQMHIDNGLAFESAMISPNVSYEAVLPVSYVQTLMEKSGCQTGQFAESCE 661

  Fly   770 DMCFHSRYRSIDGTCNNLQHPTWGASLTAFRRLAPPIYENGFSMPVGWTKGMLYSGHAKPSARLV 834
            |.||.|:|||.||.|||.:||.||.|..||.||.||.|||||:.||||.||..|:|:..|:||.|
 Worm   662 DHCFFSKYRSYDGQCNNHEHPWWGVSEMAFMRLLPPRYENGFNTPVGWEKGKRYNGYEVPNARKV 726

  Fly   835 STSLVATKEITPDARITHMVMQWGQFLDHDLDHAIPSVSSESW-DGIDCKKSCEMAPPCYPIEVP 898
            |..|:.|.|.||.:.::.|.||||||:||||....|:::..|: :|..|.::||.|.||:.|::.
 Worm   727 SRVLIGTDETTPHSHLSAMTMQWGQFIDHDLTLTAPALTRHSYKEGAFCNRTCENADPCFNIQLE 791

  Fly   899 PNDPRV-----RNRRCIDVVRSSAICGSGMTSLFFDSVQHREQINQLTSYIDASQVYGYSTAFAQ 958
            .:||::     :...|::..|:.|.||||.||..|..|.:|:|:|.||||:|||.:||.|...|.
 Worm   792 ADDPKLHTGLYQKHPCMEFERNGAACGSGETSPIFQRVTYRDQLNLLTSYLDASGIYGNSEEQAL 856

  Fly   959 ELRNLTSQEGLLRVGVHFPRQKDMLPFAAPQDGMDCRRNLD-ENTMSCFVSGDIRVNEQVGLLAM 1022
            |||:|.|..||||..:.....|..:||....| ||||||.. ||.:.||::||:|.|||:||::|
 Worm   857 ELRDLYSDHGLLRFDIVSGANKPYMPFEKDSD-MDCRRNFSRENPIKCFLAGDVRANEQLGLMSM 920

  Fly  1023 HTIWMREHNRIASKLKQINSHWDGDTLYQEARKIVGAQMQHITFKQWLPLIIGESGME-MMGEYQ 1086
            |||::||||||||:|.::|.:|||:|::||.||::||.:||||:..|||.|:|::... ::|||:
 Worm   921 HTIFLREHNRIASRLLEVNENWDGETIFQETRKLIGAMLQHITYNAWLPKILGKATYNTIIGEYK 985

  Fly  1087 GYNPQLNPSIANEFATAALRFGHTIINPILHRLNETFQPIPQGHLLLHKAFFAPWRLAYEGGVDP 1151
            ||||.:||:||||||||||||.||:||..|.|.::.|:...||||.||.|||||.||..||||||
 Worm   986 GYNPDVNPTIANEFATAALRFAHTLINTHLFRFDKDFKETKQGHLPLHNAFFAPERLVSEGGVDP 1050

  Fly  1152 LMRGFLAVPAKLKTPDQNLNTELTEKLFQTAHAVALDLAAINIQRGRDHGMPGYNVYRKLCNLTV 1216
            |:||..|.|.|:..|||.||.|||||||...|.|||||||:|||||||||:|.:..|||.|||||
 Worm  1051 LLRGLFAAPIKMPRPDQVLNKELTEKLFNRFHEVALDLAALNIQRGRDHGLPSWTEYRKFCNLTV 1115

  Fly  1217 AQDFEDLAGEISSAEIRQKMKELYGHPDNVDVWLGGILEDQVEGGKVGPLFQCLLVEQFRRLRDG 1281
            .:.:.|:...:.:..:..|::.|||..:|:|:|:||:.|.:.....:||...|::.:||:|||||
 Worm  1116 PKTWSDMKNIVQNDTVISKLQSLYGVTENIDLWVGGVTEKRTADALMGPTLACIIADQFKRLRDG 1180

  Fly  1282 DRLYYENPGVFSPEQLTQIKQANFGRVLCDVGDNFDQVTENVFILAKHQGG----YKKCEDIIGI 1342
            ||.:|||..:||..||.|||:....:::|..||:.|::..::|:   :.|.    |:.||.:..|
 Worm  1181 DRFWYENEEMFSKAQLRQIKKVTLSKIICTNGDDIDRIQRDIFV---YHGNSTQFYEPCESLPEI 1242

  Fly  1343 NLYLWQEC--GRCNSPPAIFDSYIPQTYTKRSNRQKRDLGKENDEVATAESYDSPLESLYDVNEE 1405
            ||.:|..|  ..|:|               .|...:..:|  .||.|                  
 Worm  1243 NLNMWTTCCDAMCSS---------------SSTLARNAIG--GDEKA------------------ 1272

  Fly  1406 RVSGLEELIGSFQKELKKLHKKLRKLEDSCNSADSEPVAQVVQLAAAPPQLVSKPKRSHCVDDKG 1470
                         |..|:.|...:|   ||:                               |||
 Worm  1273 -------------KRRKRRHHHSKK---SCH-------------------------------DKG 1290

  Fly  1471 TTRLNNEVW--SPDVCTKCNCFHGQVNC 1496
            ..|.:.:.|  |.|:|.:|.|..|:|.|
 Worm  1291 KRRKSGDRWNHSNDICVECMCHDGEVWC 1318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxnNP_523891.2 leucine-rich repeat 54..77 CDD:275380 6/22 (27%)
LRR <55..>184 CDD:443914 32/131 (24%)
leucine-rich repeat 78..101 CDD:275380 5/22 (23%)
leucine-rich repeat 102..125 CDD:275380 4/22 (18%)
leucine-rich repeat 126..149 CDD:275380 6/22 (27%)
leucine-rich repeat 150..173 CDD:275380 6/24 (25%)
Ig_3 235..311 CDD:464046 19/78 (24%)
Ig 366..450 CDD:472250 26/88 (30%)
Ig strand B 384..388 CDD:409544 2/4 (50%)
Ig strand C 397..401 CDD:409544 1/3 (33%)
Ig strand E 420..424 CDD:409544 2/3 (67%)
Ig strand F 434..439 CDD:409544 2/4 (50%)
Ig strand G 447..450 CDD:409544 0/2 (0%)
Ig_3 458..533 CDD:464046 21/74 (28%)
Ig 553..644 CDD:472250 8/90 (9%)
Ig strand B 570..574 CDD:409353 0/3 (0%)
Ig strand C 584..588 CDD:409353 0/3 (0%)
Ig strand E 610..614 CDD:409353 0/3 (0%)
Ig strand F 624..629 CDD:409353 0/4 (0%)
Ig strand G 638..641 CDD:409353 0/2 (0%)
peroxidasin_like 898..1338 CDD:188658 223/450 (50%)
VWC 1465..1523 CDD:278520 13/34 (38%)
pxn-2NP_509834.1 LRRNT 16..43 CDD:396168 9/26 (35%)
leucine-rich repeat 28..44 CDD:275380 5/15 (33%)
leucine-rich repeat 46..69 CDD:275378 6/22 (27%)
LRR <47..>175 CDD:443914 30/129 (23%)
leucine-rich repeat 70..93 CDD:275378 5/22 (23%)
leucine-rich repeat 94..116 CDD:275378 5/23 (22%)
leucine-rich repeat 117..140 CDD:275378 6/22 (27%)
leucine-rich repeat 141..154 CDD:275378 1/12 (8%)
Ig 346..432 CDD:472250 27/86 (31%)
Ig strand B 369..373 CDD:409367 2/3 (67%)
Ig strand C 382..386 CDD:409367 1/3 (33%)
Ig strand E 405..410 CDD:409367 1/4 (25%)
Ig strand F 419..424 CDD:409367 2/4 (50%)
I-set 445..533 CDD:400151 26/105 (25%)
Ig strand B 462..466 CDD:409390 1/3 (33%)
Ig strand C 475..479 CDD:409390 0/3 (0%)
Ig strand E 498..503 CDD:409390 3/4 (75%)
Ig strand F 513..518 CDD:409390 2/4 (50%)
Ig strand G 526..529 CDD:409390 0/2 (0%)
peroxidasin_like 798..1238 CDD:188658 221/443 (50%)

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