DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12182 and AT3G49400

DIOPT Version :10

Sequence 1:NP_647731.2 Gene:CG12182 / 38324 FlyBaseID:FBgn0028504 Length:694 Species:Drosophila melanogaster
Sequence 2:NP_190509.2 Gene:AT3G49400 / 824102 AraportID:AT3G49400 Length:892 Species:Arabidopsis thaliana


Alignment Length:711 Identity:130/711 - (18%)
Similarity:224/711 - (31%) Gaps:239/711 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 EAQHLALD----------------PAYTAVCSVAVPPARLTAVKRAPKLAAN------------- 145
            :|:|..|:                |.....||..:.|.  |.|.|...|:::             
plant   208 KAEHNVLEIEVYKQASNGQDRRSLPKALKKCSQEISPQ--TYVSREALLSSHSVAWSSLLRFSSE 270

  Fly   146 ---GNLLLGSLNTYGSLSLINKSAEYNRWNPVEGLNIAETLRDTLLPEVDIAKIKDFKSYQEYIN 207
               ||:|..||...||     ||...:.|. |.........|..:.|.|::..|....|      
plant   271 SSCGNMLRFSLLAIGS-----KSGSVSIWK-VHAPECYHIERSNVSPMVELTAIVQTHS------ 323

  Fly   208 PAWITMFAWLPDDADATG-QHVLVLGTAAGSLWLLTLSADVKTLLSHQET--------KTSMGRI 263
             :|::..:|.....|::. |.|||.|:..||         ||..:|::|.        |:|...:
plant   324 -SWVSTMSWGIFGCDSSNPQVVLVTGSCDGS---------VKIWMSNKEDLQNSVEVYKSSFFLL 378

  Fly   264 CHIQAFKDL-----------------LLVGDSNGLIHLYQLPAKGN---------------TALA 296
            ..:.|...:                 |.:|..:|...:::......               |.||
plant   379 KEVVAVNPVQVSTLSFVVSNHYNAMHLAIGKGSGSFEVWKCEISTRKFEQIVSTNAHNQVVTGLA 443

  Fly   297 LVKPLWEKADRMGLQMAVITECPRMDCYYITCCKAAHLLTW--------------SMPRTGST-- 345
                 |....|               |.| :|.:..::.:|              :.|...||  
plant   444 -----WSYDGR---------------CLY-SCSQDNYVRSWILCENAISEVPIPANTPGLSSTTD 487

  Fly   346 ------DCLQARIYVGGMKITAL----CSLENSSYVAGTAGSCLSCVQIIHENNQLSLQMQSIAM 400
                  .||...:..|.:.:..:    ..|.|..|   .|.|..:.|:.:....|.|.:.:....
plant   488 LPDDFLSCLGVALSPGNLAVALVRNFNVELLNPMY---QARSQKAAVEFLWNGAQQSGESEDSTE 549

  Fly   401 GVLQDFQVMGLCTSRHKNLMTLLLYRNKE--YLNETVSQKNQLVMQVLKVGNQDPL---DQLVRH 460
            .|.:  .::|...:...|..:.:|:..||  |||:                   ||   |.:...
plant   550 TVTE--AILGFSKNEFANWESNILWSLKEFNYLNK-------------------PLVLWDMVAAM 593

  Fly   461 LESNKPMNHYTDLLAGLRLHV----FAEENWQKFMDFCPLDSIEFADTATEGQLQQLQIKFHVLQ 521
            |...:.|..:.:|:....|.|    |.::  ....|..|..:..|:|..:.        ..|:| 
plant   594 LAFKQSMPEFVELVLTKWLSVSYLGFHDD--ISMEDLVPKITKRFSDVPSR--------LLHIL- 647

  Fly   522 NVI-------RLQSSHLQLTVHIQKSRD--ELQLLLAMLNITHIRLRLQFIG-----------SL 566
            |||       .|::..:...:..|::.|  |:.|.|.:|..:...||.:.:|           |.
plant   648 NVISRRVMLSELKTEEINRKLQGQRTNDEGEIDLWLKLLQESERELRERLVGLSFSAYLLAESSQ 712

  Fly   567 SKRSP-----------FQEQAIKCMFEEAHRLINKLNDDF--TENHALGSTARTFVEQMGNHIQ- 617
            ...||           ..:|.::...:..|..:..|:.:.  :...:..||.....|:...:.. 
plant   713 GTISPPSWNWRPAGLALLQQWVEINRDIVHSQLETLSLEVKSSRTRSSNSTETALEEEKCPYCAA 777

  Fly   618 --HLHEMLGIPVISNPQK--------------QLHRCSVSFVEISLSLERRYCSLCNRQIL 662
              :.|........|:.||              :|.||.|| :::.......:|..|||..|
plant   778 PVNFHSAEEAFCESSHQKKKKSKDKERCDESHKLERCCVS-MQVCPPTPLWFCKCCNRMTL 837

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12182NP_647731.2 zf-TFIIIC <637..687 CDD:372246 9/26 (35%)
AT3G49400NP_190509.2 TFIIIC_delta 14..179 CDD:463658
WD40 <275..463 CDD:475233 43/230 (19%)
WD40 repeat 327..382 CDD:293791 15/63 (24%)
WD40 repeat 389..434 CDD:293791 3/44 (7%)
Blue background indicates that the domain is not in the aligned region.

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