DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12182 and gtf3c4

DIOPT Version :10

Sequence 1:NP_647731.2 Gene:CG12182 / 38324 FlyBaseID:FBgn0028504 Length:694 Species:Drosophila melanogaster
Sequence 2:XP_002936231.1 Gene:gtf3c4 / 100491277 XenbaseID:XB-GENE-987995 Length:775 Species:Xenopus tropicalis


Alignment Length:427 Identity:80/427 - (18%)
Similarity:134/427 - (31%) Gaps:169/427 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   401 GVLQDFQVMGLCTSRHKNLMTLLLYRNKEY----------LNETVSQKNQL------------VM 443
            |..|:..:...|.....:..||.:.:.||.          ...||||...|            ..
 Frog    67 GCSQELTLHRTCVPAPASTCTLKVGKEKEVEDCKEMFARSKTLTVSQSFMLDRVFNPEGKFLPSF 131

  Fly   444 QVLKVGNQDPL----------------DQLVRHLESNKPMNHYTDLLAGLRL---HVFAEENWQK 489
            |..|..:..|:                ::|..|...|:  .|:..|:....|   |:| |.|::.
 Frog   132 QGFKYASWSPIGCDANGRCLVAALTLDNRLTIHANINR--LHWRQLVDLTELYGQHLF-ESNYRV 193

  Fly   490 FMDFCPLDSIEFADTATEGQLQQLQIKFHVLQNVIRLQSSHLQLTVHIQKSR---DELQLLLAML 551
            ..|..|...:   |..||.:      :.|.:|..:|::.|.:.::..|.::.   |:..:|||:|
 Frog   194 SGDETPHAGL---DDFTEFK------RRHSMQTPVRMEWSGICISQQITENNECVDQSTVLLAVL 249

  Fly   552 ----NITHIRLRLQFIGSLS-----------------------------------------KRSP 571
                ::...:|||.|:|..|                                         |..|
 Frog   250 FENGDVAVWQLRLPFLGKESITSCNTIVSGISSPSVLAWWEYEHSNRKMSGLIIGSRLGPIKIIP 314

  Fly   572 FQEQAIKCMFEEAHRLINKLNDDFTENH----------------ALGSTAR--------TFVEQM 612
            ...:|:|..|.....:|.....|....|                :|...||        ..:.:.
 Frog   315 VNLKAVKGYFTLRQPVILWQEADLLPVHGIKCIGLYHPYQNCRCSLVVAARGCYLFWCLLLISKA 379

  Fly   613 G-----NHIQHLHEMLGIPVIS-NPQKQ---LHRCSVS---------FVEISLSLERRYCSLCNR 659
            |     :|:..||   .:|:|| :..||   ::.|||.         |.|::|..|.        
 Frog   380 GLNVHNSHVTGLH---SLPIISMSVDKQNGTIYTCSVDGKVQQLIPIFTEVALKFEH-------- 433

  Fly   660 QILFELDNLQELY-----------ESGRHLTCPVCHG 685
                :|.||.:::           ..|.:|.|....|
 Frog   434 ----QLINLSDMFGPVKSHAITVSPGGAYLACITTEG 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12182NP_647731.2 zf-TFIIIC <637..687 CDD:372246 14/69 (20%)
gtf3c4XP_002936231.1 TFIIIC_delta 34..224 CDD:463658 33/168 (20%)
DUF5921 235..674 CDD:466046 45/247 (18%)
zf-TFIIIC 698..>749 CDD:372246
Blue background indicates that the domain is not in the aligned region.

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