DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9004 and Nom1

DIOPT Version :10

Sequence 1:NP_647717.1 Gene:CG9004 / 38303 FlyBaseID:FBgn0035336 Length:854 Species:Drosophila melanogaster
Sequence 2:XP_038964476.1 Gene:Nom1 / 682058 RGDID:1588109 Length:840 Species:Rattus norvegicus


Alignment Length:873 Identity:281/873 - (32%)
Similarity:449/873 - (51%) Gaps:115/873 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 KRLYFAGKTNGTQRVAAAAEA-----LAAQSQLGKNKKKKRSKKPKIINPDEIPKEQLLSGEIDS 90
            |||..|  ..|..|..:.:||     ..|:|:.|..|.:|..:|.|    .::.|.:.|      
  Rat    21 KRLRLA--VEGFVRATSESEACENRSAVARSRPGDRKSRKELRKKK----RQLRKVRRL------ 73

  Fly    91 DDDESIDSDFSDAEVDALL----PAREKMEVYEPLGKKVKKTTGGAIQRQDEEAVRRKELRQQKE 151
              ..::.|...|.|.:..|    ..|.::|    :.....|.|...::.....|..:....|.|.
  Rat    74 --QRTVGSGSGDQEGNVGLNGGPETRPRIE----MRPTPAKATATPVKASAPSANTKASATQPKA 132

  Fly   152 LESKSK----------------------KQRIKQLRIENEEDDREINKLEKKLKLNKSK--DKNR 192
            ..|.||                      ..|.:.|...|||:||||.|||:.|.|:|.|  |.:.
  Rat   133 NSSYSKGTMTSTQAKAKGAPGKPGPATATARKRALLAANEEEDREIRKLERCLGLHKRKKGDGSS 197

  Fly   193 LVRKMFNDGLDYLLDFVLDDEEEKRKWEEKQERKKKLKEQQEKEEAGMWSDEEEDKEDRDEPMDN 257
            :......|||||:|..:                       :.....|::...:|::|.:.|....
  Rat   198 VPLSFARDGLDYILGAL-----------------------EYGRSGGLYESSDEEEEGKVETGQT 239

  Fly   258 FSEDDSGSEGEDDDEDLTGEEEQSEEDSEQEENAPKIKEDIYGRKRDAEGN-------------- 308
            |.|.|..|..|:.:||   .:.|..::.:::.|:.|..|...| .|..:||              
  Rat   240 FLESDPESNSEESEED---PDSQVPQEDQEDVNSQKEGETESG-TRGNKGNKKVRFAEVVEKSES 300

  Fly   309 ILPDPVELEAS---AAGQKYIPPHQRALMAASAGSSEKQAEILARLLKQCKGLLNRLSEANLHKI 370
            .|.|.:|.:.|   .:|:|||||..|:.........|:    |.||.|..|||:|||||.|:..|
  Rat   301 SLEDDLEHQESHCVESGEKYIPPQLRSEETVDVQKKEE----LDRLKKHVKGLINRLSEPNMASI 361

  Fly   371 AAGIEELYMKNSRYNMNETLTKLIQEALLGYTRTNERMVQEHMVLLAYLHAQVGSEIGAHFLQTF 435
            :..:|||||.:||..||:|||.::.:|.:..:....|::.||:.|::.||..||:|:||.||:..
  Rat   362 SGQLEELYMAHSRKYMNDTLTAVLMDACVTTSTMPSRLMMEHVFLVSILHHTVGTEVGACFLEAV 426

  Fly   436 VELFDGYVKNIATLEVEDKQLNNLVLVLCYMYLFKIYELNLLMELIGKLSDQLCEKSVECLLLIF 500
            |:.||...::..    |.|:|:||..::.::|.|.:.:..|:.:::.||.....|:.:|.:||:.
  Rat   427 VKKFDDVYRDGG----EGKELDNLFTMIAHLYNFHVVQSLLIFDILKKLVGTFTERDIELILLML 487

  Fly   501 QSIGFRLRKDDPLAFKTMMQKVQSQIASAPLELKENPRLRFMVDILNAVKNNNMQKLPQYDPELA 565
            :::||.|||||.|:.|.::.:.|:|...|..:.::..|:|||::.:.|:|||:|:|:|.|:||..
  Rat   488 KNVGFALRKDDALSLKELITEAQAQAIGAGNKFQDQNRVRFMLETMLALKNNDMRKIPGYNPEPV 552

  Fly   566 ENLRKRLKAMLKN--DRYVVTLNITLEDLLRADKVGKWWIVGSAWTGNLDEMGSAKQKQDKNSSK 628
            |.|:|..:|:::|  ......|.|:.:.:|.|::.|:||||||||:|.     ...:....:..|
  Rat   553 EKLKKLQRALVRNASSGSETQLRISWDGILNAEQTGRWWIVGSAWSGT-----PMIENHHTHLQK 612

  Fly   629 SANGGFADQLLELARKQQMNTAERRNIFCIIMSAADYVDAFEKILHLSLKDQ--RAVAYVIIHCA 691
            ...|..:.::|||||||:|||..||||||.:|::.|::|||||:|.|.||||  |.:.::::.|.
  Rat   613 PLAGTASSKMLELARKQRMNTDVRRNIFCTMMTSEDFLDAFEKLLKLGLKDQQEREIVHILMDCC 677

  Fly   692 LNEKRANPYYAHLALKFCQFNRKYQLAFQFASWDRINDIEKLSKPQIRNLASFLQQVILAAGLQL 756
            |.||..||:||.||.|||.:.|::|:.|||:.||:..|:|.||..:..||...|..::....|.|
  Rat   678 LQEKTYNPFYAFLASKFCAYERRFQMTFQFSIWDKFRDLENLSGTKFSNLVYLLTHLLKTKSLPL 742

  Fly   757 SVLKVVDFMQLDKLSFYFMKEVMVRLLLANDEREIYQTFERVAKNTKLQQFKQSVRLFLQHFLLQ 821
            ||||||:|.:|||...:|::.|:..||:..::.::...|.||:.|.||...::.::||:.||||:
  Rat   743 SVLKVVEFSELDKPRVHFLRRVLTELLMETEDDDLVVIFSRVSSNPKLGMLREGLKLFISHFLLK 807

  Fly   822 EEQLDKLKLKDEDRQLLQQRVDHIDKLL 849
            ..|..:   ..|...||::|.....|.|
  Rat   808 PAQPQQ---SAEKASLLRERAGLASKSL 832

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9004NP_647717.1 MIF4G 352..553 CDD:397130 73/200 (37%)
MA3 652..755 CDD:397128 47/104 (45%)
Nom1XP_038964476.1 PTZ00436 <55..>162 CDD:185616 20/122 (16%)
MIF4G 344..540 CDD:214713 73/199 (37%)
MA3 635..741 CDD:413424 47/105 (45%)

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