DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1317 and AT1G11020

DIOPT Version :9

Sequence 1:NP_001163328.1 Gene:CG1317 / 38300 FlyBaseID:FBgn0035333 Length:988 Species:Drosophila melanogaster
Sequence 2:NP_563883.1 Gene:AT1G11020 / 837644 AraportID:AT1G11020 Length:321 Species:Arabidopsis thaliana


Alignment Length:210 Identity:51/210 - (24%)
Similarity:74/210 - (35%) Gaps:79/210 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DDLSQGDICRVC---RCEAQPDRPLFYPCICTGSIKYIHQDCLMLW------MRYSHKEYCELCS 57
            :|.|....||:|   ..|...|. |..||:|.|:.:::|:.||..|      ..:||   |..|.
plant    55 NDASSAPCCRICLEDDSELLGDE-LISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSH---CTTCK 115

  Fly    58 YSFSFQPIYAPDMPRVLPIKDVLVGLMSAVLEGARCWLH-----------YTLVGLAWFGVVPLS 111
            ..|..         ||.|.:|            ...|..           ..||.||...|:.:.
plant   116 AQFHL---------RVEPFED------------NNSWRRKAKFRLFVARDVLLVFLAVQTVIAVM 159

  Fly   112 AYRTYRYL------FRAS---SFDMILT---LPF----DIFSVENLASDAFRGCFVVTCTLLSFI 160
            |  .:.|:      ||.|   .:|.||:   :||    .:.|.           ||:|    .|:
plant   160 A--GFAYMMDKDGEFRNSFNDDWDRILSKHPIPFYYCIGVISF-----------FVLT----GFL 207

  Fly   161 GLVWLREQILHGGGP 175
            |:: |....|:|..|
plant   208 GII-LHCSALNGNDP 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1317NP_001163328.1 RINGv 9..56 CDD:128983 17/55 (31%)
DotA_TraY <737..913 CDD:275142
AT1G11020NP_563883.1 RING_CH-C4HC3_MARCH 63..115 CDD:319409 17/55 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5183
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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