DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1317 and PIT1

DIOPT Version :10

Sequence 1:NP_647715.2 Gene:CG1317 / 38300 FlyBaseID:FBgn0035333 Length:988 Species:Drosophila melanogaster
Sequence 2:NP_567222.1 Gene:PIT1 / 828146 AraportID:AT4G02075 Length:218 Species:Arabidopsis thaliana


Alignment Length:225 Identity:46/225 - (20%)
Similarity:80/225 - (35%) Gaps:51/225 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 CRVCRCEAQPDRPLFY--PCICTGSIKYIHQDCLMLWMRYSHKEYCELCSYSFSFQPIYAPDMPR 72
            ||:|..|.:..   |:  ||.|:|::|:.|::|:..|........||:|      ..:|......
plant    20 CRICHEEEEES---FFEVPCACSGTVKFAHRNCIQRWCNEKGNTTCEIC------LQVYKDGYTA 75

  Fly    73 VLPIKDVLVGLMSAVLEGARCWLHYTLVGLAWFGVVPLSA-------------YRTYRYLFRASS 124
            ||....::...::..:.|.|......||.:|...:...::             :....:|....:
plant    76 VLKQSKLIEQEVTIRVNGRRRRRSRRLVSIAESDISQCNSVADRGASFCRSLTFTLSVFLLMKHT 140

  Fly   125 FDMIL---TLPFDIFSVENL-ASDAFRGCFVVTCTLLSFIGLVWLREQILHGGGPDWLERDDAPL 185
            ||:|.   ..||.:|:|..| |.......|::..|:.:....:..|.|.......|.|..||   
plant   141 FDVIYGTEEYPFSVFTVLTLKAIGILLPMFIIIRTISTIQKTLRRRHQYPESEEEDRLSSDD--- 202

  Fly   186 QAAAANPAPDPAAEAAPQPQDDNNNADDNE 215
                                ||:...:|.|
plant   203 --------------------DDDLEEEDEE 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1317NP_647715.2 SSM4 9..>206 CDD:227510 42/214 (20%)
RING_CH-C4HC3_MARCH6 9..58 CDD:438362 16/49 (33%)
SSM4 <359..>554 CDD:227510
PIT1NP_567222.1 RINGv 20..65 CDD:128983 15/47 (32%)
DUF3675 72..176 CDD:463576 18/103 (17%)
Blue background indicates that the domain is not in the aligned region.

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