DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1317 and zgc:158785

DIOPT Version :9

Sequence 1:NP_001163328.1 Gene:CG1317 / 38300 FlyBaseID:FBgn0035333 Length:988 Species:Drosophila melanogaster
Sequence 2:NP_001074165.1 Gene:zgc:158785 / 791214 ZFINID:ZDB-GENE-070112-1712 Length:231 Species:Danio rerio


Alignment Length:166 Identity:44/166 - (26%)
Similarity:68/166 - (40%) Gaps:42/166 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LSQGDICRVCRCEAQPDRPLFYPCICTGSIKYIHQDCLMLWMRYSHKEYCELCSYSFSFQP---- 64
            :::...||:|. |......|..||.|.||:..:|:.||..|:..|....||||.:.::.:.    
Zfish    44 IAEEPFCRICH-EDSAAGDLLSPCECAGSLAMVHRVCLEQWLTASGTSSCELCHFQYALERLPKP 107

  Fly    65 ----IYAPDMP---RVLPIKDVLVGLMSAVLEGARCW--------LHYT----LVGLAWFGVVPL 110
                :.||.|.   |.| ..||:..|....|.....|        |:|:    .|||.   ::.|
Zfish   108 FTEWLSAPSMQQQRRTL-CGDVICFLFITPLASLSGWLCVQGAMDLYYSNGMEAVGLI---ILTL 168

  Fly   111 SAYRTY--------RY---LFR---ASSFDMILTLP 132
            :.:..|        ||   |||   |::..:.|.:|
Zfish   169 TLFTIYLFWTVVSLRYHIHLFRTWNATNPSVRLQIP 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1317NP_001163328.1 RINGv 9..56 CDD:128983 17/46 (37%)
DotA_TraY <737..913 CDD:275142
zgc:158785NP_001074165.1 RINGv 49..96 CDD:128983 18/47 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5183
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.