DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1317 and Marchf10

DIOPT Version :9

Sequence 1:NP_001163328.1 Gene:CG1317 / 38300 FlyBaseID:FBgn0035333 Length:988 Species:Drosophila melanogaster
Sequence 2:NP_766156.2 Gene:Marchf10 / 632687 MGIID:2443469 Length:788 Species:Mus musculus


Alignment Length:60 Identity:21/60 - (35%)
Similarity:34/60 - (56%) Gaps:9/60 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 QGDICRVCR-CEAQPDRPLFYPCICTGSIKYIHQDCLMLWMR--------YSHKEYCELC 56
            :||:||:|: ....|..||..||.|.||::::||:||..|::        ....:.||:|
Mouse   635 EGDLCRICQIAGGSPANPLLEPCGCVGSLQFVHQECLKKWLKVKITSGADLGTVKTCEMC 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1317NP_001163328.1 RINGv 9..56 CDD:128983 18/55 (33%)
DotA_TraY <737..913 CDD:275142
Marchf10NP_766156.2 RING_CH-C4HC3_MARCH10 639..698 CDD:319727 19/56 (34%)
RING-CH finger (C4HC3-type) 639..694 CDD:319727 18/54 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5183
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R328
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.930

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