DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG1317 and march2

DIOPT Version :9

Sequence 1:	NP_001163328.1	Gene:	CG1317 / 38300	FlyBaseID:	FBgn0035333	Length:	988	Species:	Drosophila melanogaster
Sequence 2:	NP_001038255.2	Gene:	march2 / 555611	ZFINID:	ZDB-GENE-050208-777	Length:	249	Species:	Danio rerio

Alignment Length:	154	Identity:	41/154 - (26%)
Similarity:	65/154 - (42%)	Gaps:	48/154 - (31%)

- Green bases have known domain annotations that are detailed below.

  Fly     5 SQGD--ICRVCR-----CEAQPDRPLFYPCICTGSIKYIHQDCLMLWMRYSHKEYCELCSYSFSF 62
            :|.|  .||:|.     |.::   .|..||.|||::..:|:.||..|:..|:..|||||...|:.
Zfish    57 TQSDRPTCRICHEGQDVCNSE---GLLSPCDCTGTLGTVHKSCLEKWLSSSNTSYCELCHTEFTI 118

  Fly    63 QPIYAPDMPRVLP--IKD-----------------VLVGLMSAV-----LEGARCWLHYT----L 99
            :     ..||.|.  ::|                 :.:..::|:     |.||:..||:.    .
Zfish   119 E-----RRPRPLTEWLRDPGPRNEKRTLFCDMVCFLFITPLAAISGWLCLRGAQDHLHFNSRLEA 178

  Fly   100 VGL-----AWFGVVPLSAYRTYRY 118
            |||     |.|.:..|....::||
Zfish   179 VGLIALTIALFTIYVLWTLVSFRY 202

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG1317	NP_001163328.1	RINGv	9..56	CDD:128983	18/51 (35%)
CG1317	NP_001163328.1	DotA_TraY	<737..913	CDD:275142
march2	NP_001038255.2	RINGv	64..113	CDD:128983	19/51 (37%)
march2	NP_001038255.2	Vpu	176..>220	CDD:109608	8/27 (30%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5183
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.900