DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1317 and Marchf4

DIOPT Version :10

Sequence 1:NP_647715.2 Gene:CG1317 / 38300 FlyBaseID:FBgn0035333 Length:988 Species:Drosophila melanogaster
Sequence 2:NP_001038998.1 Gene:Marchf4 / 381270 MGIID:2683550 Length:409 Species:Mus musculus


Alignment Length:274 Identity:55/274 - (20%)
Similarity:93/274 - (33%) Gaps:89/274 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDDLSQGDICRVCRCEAQPDRPLFYPCICTGSIKYIHQDCLMLWMRYSHKEYCELCSYSFSFQPI 65
            :|...:..:||:| .:......|..||.|.||:|..||.||:.|:.......||||.|.:....|
Mouse   153 LDSGMRTPLCRIC-FQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYYKYHVIAI 216

  Fly    66 YAPDMPRVLPIKDVLVGL-------MSAVLEGARCWLHYTLVGLAWFGVVPLSAYRTYRYLFRAS 123
            ...:     |::...:.|       ::|.:.|:.    :.:..::|.      .:.|:....:..
Mouse   217 STKN-----PLQWQAISLTVIEKVQIAAAILGSL----FLIASISWL------IWSTFSPSAKWQ 266

  Fly   124 SFDMILTLPFDIFSVENLASDAFRGCFVVTCTLLSFIGLVWLREQILHGG-------------GP 175
            ..|::..:.:.::           |...|.|     |||      |:|.|             ..
Mouse   267 RQDLLFQICYGMY-----------GFMDVVC-----IGL------IIHEGPSVYRIFKRWQAVNQ 309

  Fly   176 DW--LERDDAP------------LQAAAANPAPDPAAEAAPQPQDDNNNADDNEAPAPADNDGQD 226
            .|  |..|...            ||.:::..|..|:||             :..|..||..:|..
Mouse   310 QWKVLNYDKTKDLEDQKSGGRTNLQTSSSAQANLPSAE-------------EEAASPPAREEGPT 361

  Fly   227 AQAQDAAPAAAAPV 240
            .    ||...:.||
Mouse   362 R----AASHPSGPV 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1317NP_647715.2 SSM4 9..>206 CDD:227510 46/230 (20%)
RING_CH-C4HC3_MARCH6 9..58 CDD:438362 19/48 (40%)
SSM4 <359..>554 CDD:227510
Marchf4NP_001038998.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 92..133
RING_CH-C4HC3_MARCH4 156..211 CDD:438473 20/55 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 323..372 14/66 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 389..409
Blue background indicates that the domain is not in the aligned region.

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