DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1317 and sta-2

DIOPT Version :10

Sequence 1:NP_647715.2 Gene:CG1317 / 38300 FlyBaseID:FBgn0035333 Length:988 Species:Drosophila melanogaster
Sequence 2:NP_001122963.1 Gene:sta-2 / 3565291 WormBaseID:WBGene00010251 Length:567 Species:Caenorhabditis elegans


Alignment Length:54 Identity:16/54 - (29%)
Similarity:24/54 - (44%) Gaps:14/54 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   497 CPDFLPYALSGDSAVNLQLLLLQ--------IVLPGFFEQTQTRIWLKGLLRIW 542
            |.|.|   |||..|.|.||..:|        ::|.  ||..:..: :..:|.:|
 Worm    45 CADSL---LSGKIAQNEQLPFIQRTLQICENVILN--FEDEKQHL-MSDVLLVW 92

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1317NP_647715.2 SSM4 9..>206 CDD:227510
RING_CH-C4HC3_MARCH6 9..58 CDD:438362
SSM4 <359..>554 CDD:227510 16/54 (30%)
sta-2NP_001122963.1 SH2_STAT_family 433..545 CDD:198175
Blue background indicates that the domain is not in the aligned region.

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