DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1317 and Marchf10

DIOPT Version :9

Sequence 1:NP_001163328.1 Gene:CG1317 / 38300 FlyBaseID:FBgn0035333 Length:988 Species:Drosophila melanogaster
Sequence 2:NP_001013995.1 Gene:Marchf10 / 303596 RGDID:1311692 Length:790 Species:Rattus norvegicus


Alignment Length:64 Identity:23/64 - (35%)
Similarity:36/64 - (56%) Gaps:9/64 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DDLSQGDICRVCR-CEAQPDRPLFYPCICTGSIKYIHQDCLMLWMR--------YSHKEYCELC 56
            |...:||:||:|: ....|..||..||.|.||::::||:||..|::        .|..:.||:|
  Rat   633 DSEEEGDLCRICQIAGGSPANPLLEPCGCVGSLQFVHQECLKKWLKVKITSGADLSTVKTCEMC 696

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1317NP_001163328.1 RINGv 9..56 CDD:128983 19/55 (35%)
DotA_TraY <737..913 CDD:275142
Marchf10NP_001013995.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 33..240
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 323..416
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 507..569
RING_CH-C4HC3_MARCH10 641..700 CDD:319727 20/56 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 757..790
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5183
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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