DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1317 and sgsm1

DIOPT Version :9

Sequence 1:NP_001163328.1 Gene:CG1317 / 38300 FlyBaseID:FBgn0035333 Length:988 Species:Drosophila melanogaster
Sequence 2:NP_001106422.2 Gene:sgsm1 / 100127590 XenbaseID:XB-GENE-6043600 Length:1096 Species:Xenopus tropicalis


Alignment Length:166 Identity:39/166 - (23%)
Similarity:66/166 - (39%) Gaps:57/166 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   818 YCKIAIALTMMGPDWHLKRALDRAYMDGLRDFDLKFVMRDLAVPVVTTIGLALAIPYVMAHMMFP 882
            ||:            ||...  |.::..|  .:.|.|..|  |||..:.||.:||        :.
 Frog   501 YCR------------HLSTV--RTHLSAL--VNHKIVYPD--VPVDASFGLTVAI--------WQ 539

  Fly   883 IFLAD--AYAQHVVARLVYPVSFIVVGSICILLFQIDQLKKLYLSIKVDKYLVGQRLVNYEHRKK 945
            .:|.|  :|.:..:.||:|      .|.|      ..::::     :|..:|:|    :|:....
 Frog   540 KYLEDSKSYEEQELLRLIY------YGGI------QHEIRR-----EVWPFLLG----HYQFGMT 583

  Fly   946 QQQQQEEEKEQQRAARELR-------ENQERDRERE 974
            ::.::|.: ||.||..|..       |...|.||:|
 Frog   584 EEDRREVD-EQIRACYEQTMAEWLGCEAIVRQREKE 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1317NP_001163328.1 RINGv 9..56 CDD:128983
DotA_TraY <737..913 CDD:275142 24/96 (25%)
sgsm1NP_001106422.2 RUN 44..186 CDD:367169
PH_RUTBC 254..424 CDD:275431
TBC 872..1053 CDD:214540
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5183
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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