DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Rap1 and RAS1

Sequence 1:NP_001189023.1 Gene:Rap1 FlyBaseID:FBgn0004636 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_014744.1 Gene:RAS1 SGDID:S000005627 Length:309 Species:Saccharomyces cerevisiae

Alignment Length:164 Identity:96/165 (58%)
Similarity:131/165 (79%) Gaps:0/165 (0%)


  Fly     1 MREYKIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFT 65
            :|||||||:|.|||||||||:||:|..||::|||||||||||||.:|.:..:|:||||||.|:::
Yeast     8 IREYKIVVVGGGGVGKSALTIQFIQSYFVDEYDPTIEDSYRKQVVIDDKVSILDILDTAGQEEYS 72

  Fly    66 AMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTDDVPMVLVGNKCDLEEERVVGKEL 130
            |||:.||:.|:||:||||:|::::|::|....:||.||||:|.:|:|:||||.|||.||.|..|.
Yeast    73 AMREQYMRTGEGFLLVYSVTSRNSFDELLSYYQQIQRVKDSDYIPVVVVGNKLDLENERQVSYED 137

  Fly   131 GKNLATQFNCAFMETSAKAKVNVNDIFYDLVRQI 164
            |..||.|.|..|:|||||..:||::.||.|:|.:
Yeast   138 GLRLAKQLNAPFLETSAKQAINVDEAFYSLIRLV 171

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Rap1NP_001189023.1 Rap1 3..165 CDD:133375 95/163 (58%)
RAS1NP_014744.1 small_GTPase 9..172 CDD:197466 96/164 (59%)
P-loop_NTPase 10..172 CDD:304359 95/163 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 FOG0000044
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 avgDist Average_Evolutionary_Distance R1068
TreeFam 00.000 Not matched by this tool.
22.030

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