DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Rap1 and Rap2a

Sequence 1:NP_001189023.1 Gene:Rap1 FlyBaseID:FBgn0004636 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_083795.2 Gene:Rap2a MGIID:97855 Length:183 Species:Mus musculus

Alignment Length:182 Identity:111/183 (61%)
Similarity:140/183 (77%) Gaps:3/183 (2%)


  Fly     1 MREYKIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFT 65
            |||||:||||||||||||||||||...|:|||||||||.|||::|||....:||||||||||||.
Mouse     1 MREYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFA 65

  Fly    66 AMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTDDVPMVLVGNKCDLEEERVVGKEL 130
            :|||||:||||||:||||:..|.:|.|::.:|:||:|||..:.||::|||||.|||.||.|....
Mouse    66 SMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDLESEREVSSNE 130

  Fly   131 GKNLATQFNCAFMETSAKAKVNVNDIFYDLVRQIN-KKSPEKKQKKPKKSLC 181
            |:.||.::.|.|||||||:|..|:::|.::|||:| ...|:|..  |..|.|
Mouse   131 GRALAEEWGCPFMETSAKSKTMVDELFAEIVRQMNYAAQPDKDD--PCCSAC 180

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Rap1NP_001189023.1 Rap1 3..165 CDD:133375 103/162 (64%)
Rap2aNP_083795.2 Rap2 16..165 CDD:133376 91/149 (61%)
Effector region 32..40 7/8 (88%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 D1353024at2759
OrthoFinder 1 1.000 FOG0000044
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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