DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Rap1 and zgc:55558

Sequence 1:NP_001189023.1 Gene:Rap1 FlyBaseID:FBgn0004636 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_956552.1 Gene:zgc:55558 ZFINID:ZDB-GENE-040426-740 Length:187 Species:Danio rerio

Alignment Length:188 Identity:102/189 (54%)
Similarity:133/189 (70%) Gaps:5/189 (3%)


  Fly     1 MREYKIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFT 65
            |.|||:||:|:|||||||||:|.:|..||::|||||||||||||.:||:.|:|:||||||.|:::
Zfish     1 MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYS 65

  Fly    66 AMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTDDVPMVLVGNKCDLEEERVVGKEL 130
            ||||.||:.|:||:.|::|....:|.|:...||||.||||:|:|||||||||.|| ..|.|....
Zfish    66 AMRDQYMRTGEGFLCVFAINNAKSFEDVHLYREQINRVKDSDNVPMVLVGNKSDL-TSRTVDTRQ 129

  Fly   131 GKNLATQFNCAFMETSAKAKVNVNDIFYDLVRQINK-KSPEKKQKKPKKSL---CVLL 184
            .:.||..:...|:|||||.:..|.:.||.|||:|.: |...:..||.||..   |.||
Zfish   130 AQELARSYGVPFVETSAKTRQGVEEAFYSLVREIRRYKETNRSNKKSKKHTQRRCTLL 187

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Rap1NP_001189023.1 Rap1 3..165 CDD:133375 93/162 (57%)
zgc:55558NP_956552.1 H_N_K_Ras_like 3..164 CDD:133338 93/162 (57%)
RAS 16..166 CDD:214541 83/151 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 FOG0000044
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 avgDist Average_Evolutionary_Distance R1068
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.030

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