DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Rap1 and rras

Sequence 1:NP_001189023.1 Gene:Rap1 FlyBaseID:FBgn0004636 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_001107720.1 Gene:rras XenbaseID:XB-GENE-493188 Length:203 Species:Xenopus tropicalis

Alignment Length:193 Identity:94/194 (48%)
Similarity:133/194 (69%) Gaps:9/194 (5%)


  Fly     1 MREYKIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFT 65
            :.:||:||:|.|||||||||:||:|..||..|||||||||.|...:||:|..|:||||||.|:|.
 Frog    11 VEKYKLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYTKICSIDGKQTRLDILDTAGQEEFG 75

  Fly    66 AMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTDDVPMVLVGNKCDLEEERVVGKEL 130
            |||:.||:.|:||:|:::|..:.:||::.....|||||||.|:.||:|||||.||:.:|.|.||.
 Frog    76 AMREQYMRTGEGFLLIFAINDRGSFNEMSKFHTQILRVKDRDEFPMILVGNKADLDLQRQVTKEE 140

  Fly   131 GKNLATQFNCAFMETSAKAKVNVNDIFYDLVRQINK---------KSPEKKQKKPKKSLCVLL 184
            ..:.|.:.:..:||.|||.::||::.|::|||.|.|         .:...|:|:.|...||:|
 Frog   141 ALSFARENHIPYMEASAKIRLNVDESFHELVRAIRKFQELECPPTPAVNPKKKESKSCPCVIL 203

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Rap1NP_001189023.1 Rap1 3..165 CDD:133375 87/162 (54%)
rrasNP_001107720.1 M_R_Ras_like 12..175 CDD:133345 87/163 (53%)
small_GTPase 26..177 CDD:197466 79/151 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 FOG0000044
OrthoInspector 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 avgDist Average_Evolutionary_Distance R1068
TreeFam 00.000 Not matched by this tool.
22.030

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