DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cpr62Bb and Cpr62Bc

DIOPT Version :10

Sequence 1:NP_647667.1 Gene:Cpr62Bb / 38240 FlyBaseID:FBgn0035280 Length:194 Species:Drosophila melanogaster
Sequence 2:NP_647668.1 Gene:Cpr62Bc / 38241 FlyBaseID:FBgn0035281 Length:180 Species:Drosophila melanogaster


Alignment Length:209 Identity:89/209 - (42%)
Similarity:108/209 - (51%) Gaps:51/209 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NFVCFVILSLA-----------LFASVAVARPGY-----ALDYYDHPKYAFNYGVADHSTGDVKS 51
            :.:|..:||.|           |:|:......|:     .:||:.:|||.:||||||..||||||
  Fly     6 SLICLAVLSAASAGVLHGHGAGLYAAAPAIYAGHGHHDEGIDYHAYPKYHYNYGVADSHTGDVKS 70

  Fly    52 QHETRDGDVVKGQYSLVEPDGSIRTVDYTADSIHGFNAVVTKSGPTVHAQAVVASPIVAHKPVLT 116
            |||.||||||||.|||||||||:|||:||||..:||||||.|:|||||                 
  Fly    71 QHEVRDGDVVKGSYSLVEPDGSVRTVEYTADDHNGFNAVVHKTGPTVH----------------- 118

  Fly   117 HYEPQVVKHVAP-VAHAPLVVASPAPYVAKHYAPAAAAPIHYDYDDGYYNQGQQYEYIPQYDQYS 180
            |..|.||.|.|| |.||   ..:.||.:|.|.|.|.|.|.          .|.....:|.|    
  Fly   119 HAAPAVVAHAAPAVVHA---APAYAPAIAHHVAAAPAVPY----------AGSLAHQVPAY---- 166

  Fly   181 GHYGHYASPYAGHY 194
            |:..|.|..:..||
  Fly   167 GYATHNAHAHVAHY 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpr62BbNP_647667.1 Chitin_bind_4 35..87 CDD:459790 40/51 (78%)
Cpr62BcNP_647668.1 Chitin_bind_4 54..106 CDD:459790 40/51 (78%)

Return to query results.
Submit another query.