DRSC/TRiP Functional Genomics Resources

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Protein Alignment: drpr and pdgfrl

Sequence 1:NP_001261276.1 Gene:drpr FlyBaseID:FBgn0027594 Length:1042 Species:Drosophila melanogaster
Sequence 2:NP_956608.2 Gene:pdgfrl ZFINID:ZDB-GENE-040426-901 Length:371 Species:Danio rerio

Alignment Length:113 Identity:28/114 (25%)
Similarity:38/114 (33%) Gaps:45/114 (39%)


  Fly   395 FLRYG------PNCELTCNCKNGAKCSPVNGTCLCAPGWRGPTCEESCEPG--------TFGQDC 445
            |||.|      |...|...||         ||.:   ||..|:..::....        .:||  
Zfish    71 FLRLGESLSLNPGKTLELRCK---------GTKI---GWAYPSYLDTFNDNRLSIKQHERYGQ-- 121

  Fly   446 ALRCDCQNGAKCEPETGQCLCTAGWKNIKCDRPCDLNHFGQDCAKVCD 493
             |.....:.|    :||:..|   |. :.||        ||:|.|..|
Zfish   122 -LILTSPSAA----DTGEYSC---WV-LLCD--------GQECEKDVD 152

Known Domains:


GeneSequenceDomainRegion External IDIdentity
drprNP_001261276.1 EMI 27..92 CDD:284877
EGF_CA 274..319 CDD:304395
DSL <479..518 CDD:302925 5/16 (31%)
DSL <567..606 CDD:302925
pdgfrlNP_956608.2 IG_like 178..249 CDD:214653
Ig 186..249 CDD:143165
Ig 287..356 CDD:299845
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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