DRSC/TRiP Functional Genomics Resources

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Protein Alignment: drpr and Csf1r

Sequence 1:NP_001261276.1 Gene:drpr FlyBaseID:FBgn0027594 Length:1042 Species:Drosophila melanogaster
Sequence 2:NP_001025072.1 Gene:Csf1r RGDID:2425 Length:1022 Species:Rattus norvegicus

Alignment Length:152 Identity:34/153 (22%)
Similarity:51/153 (33%) Gaps:37/153 (24%)


  Fly   367 HTDLCHP-ETGN----CQCSIGWSSAQCTRPCTF---LRYGPNCELTCNCKNGAKCSPVNGT--C 421
            |.:...| |.|.    .|...||::      .||   |||.|...:|        ..||||:  .
  Rat   409 HLNRVKPLEAGRYSLMAQNKAGWNN------LTFELTLRYPPEVSVT--------WIPVNGSDVL 459

  Fly   422 LC-APGWRGPTCEESCEPGTFGQDC---ALRCDCQNGAKCEPET-GQCLCTAGWKNIKCDRPCDL 481
            || ..|:.        :|.....:|   ..|||....::...:| .:.|....:..:.......:
  Rat   460 LCDVSGYP--------QPNVTWMECRGHTDRCDEAQASQVWDDTQPEVLSQKPFHRVILQSQLPI 516

  Fly   482 NHFGQDCAKVCDCHNNAACNPQ 503
            .....:...||..|||...:.|
  Rat   517 GTLKHNMTYVCRAHNNVGNSSQ 538

Known Domains:


GeneSequenceDomainRegion External IDIdentity
drprNP_001261276.1 EMI 27..92 CDD:284877
EGF_CA 274..319 CDD:304395
DSL <479..518 CDD:302925 6/26 (23%)
DSL <567..606 CDD:302925
Csf1rNP_001025072.1 Ig 69..129 CDD:299845
IG_like 72..145 CDD:214653
IG_like 157..239 CDD:214653
Ig 157..223 CDD:299845
ig 251..337 CDD:278476
IG_like 253..339 CDD:214653
Ig 343..442 CDD:299845 11/39 (28%)
IG_like 355..439 CDD:214653 9/36 (25%)
Ig 458..541 CDD:143165 16/90 (18%)
PTKc_CSF-1R 585..957 CDD:133237
Pkinase_Tyr 624..948 CDD:285015
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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