DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX5 and rab36

DIOPT Version :10

Sequence 1:NP_647644.2 Gene:RabX5 / 38209 FlyBaseID:FBgn0035255 Length:277 Species:Drosophila melanogaster
Sequence 2:XP_004910645.2 Gene:rab36 / 733793 XenbaseID:XB-GENE-490801 Length:264 Species:Xenopus tropicalis


Alignment Length:240 Identity:100/240 - (41%)
Similarity:144/240 - (60%) Gaps:21/240 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RLRQNLLLPQPPTVVLHDPRTHLRHLPPAYSAAQTPLSKERDFGAQVRYYLEAPRKPKFRPCKVI 68
            |:..|:..|..|. ..|..:|.       :.|....:.::|:.||           ...:..|.:
 Frog    13 RIISNMPKPYTPE-ACHQYQTQ-------FDAEVQTVCQQRNAGA-----------IGLKMSKAV 58

  Fly    69 FVGDCSVGKTAIVNRFCYDKFQSNYKATIGVDFELENFSILGHNYSLEMWDTAGQERFRCIAGAY 133
            .|||..||||:::||||.:.|..:||||||||||:|.|.|||..::.::|||||||:|:|||.||
 Frog    59 MVGDLYVGKTSLINRFCKNVFDRDYKATIGVDFEIERFEILGIPFNFQIWDTAGQEKFKCIASAY 123

  Fly   134 YRNASVIVVTYDMSKKDSLESAKKWLNSALNYNASKRPLVFLVGTKADLLSKEEFVRMERLAGLA 198
            ||.|.||:..:|:....:||:.::|:..||..|......:||||||.|.||:.|..|.|:.|...
 Frog   124 YRGAQVIITAFDLGDISTLENTRRWVQDALKENEPDTCSIFLVGTKKDTLSEAELERTEQDAVRL 188

  Fly   199 AAELQAEYWSVSARSGFKVTELFQRIAALAFEEAVMQEIRSIKNK 243
            |.:||||||||||::|..|.|.|.|:|:||||:::.:|:.  ||:
 Frog   189 AIDLQAEYWSVSAKTGENVKEFFFRVASLAFEQSMKKELE--KNR 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX5NP_647644.2 P-loop containing Nucleoside Triphosphate Hydrolases 66..230 CDD:476819 85/163 (52%)
rab36XP_004910645.2 P-loop containing Nucleoside Triphosphate Hydrolases 55..220 CDD:476819 85/164 (52%)

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