DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX5 and Rab35

DIOPT Version :10

Sequence 1:NP_647644.2 Gene:RabX5 / 38209 FlyBaseID:FBgn0035255 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster


Alignment Length:214 Identity:67/214 - (31%)
Similarity:101/214 - (47%) Gaps:25/214 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 KVIFVGDCSVGKTAIVNRFCYDKFQSNYKATIGVDFELENFSILGHNYSLEMWDTAGQERFRCIA 130
            |::.:||..|||::::.||..|.|..:|..||||||::....|.|....|::||||||||||.|.
  Fly    10 KLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQERFRTIT 74

  Fly   131 GAYYRNASVIVVTYDMSKKDSLESAKKWLNSAL-NYNASKRPLVFLVGTKADLLSKEEFVRMERL 194
            ..|||....::|.||::..:|..:.::||.... |.:..|:   .|||.|.|  ..:..|.:...
  Fly    75 STYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCDVVKK---VLVGNKND--DPDRKVVITED 134

  Fly   195 AGLAAAELQAEYWSVSARSGFKVTELFQRIAALAFEEAVMQEIRSIKNKPQEQATQASVKSQTFD 259
            |...|.::..|.:..||:....|..:|..|.....:       ..::..|.||      :..|..
  Fly   135 AQRFAKQMDIELFETSAKDNINVENMFLSITRQVLD-------HKLRTSPNEQ------QKDTLH 186

  Fly   260 LR-NFFGSRLSQQKSGCTC 277
            |: |..||     |.|..|
  Fly   187 LKPNPKGS-----KGGKCC 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX5NP_647644.2 P-loop containing Nucleoside Triphosphate Hydrolases 66..230 CDD:476819 56/164 (34%)
Rab35NP_608373.1 Rab35 3..201 CDD:133310 67/214 (31%)

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