DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX5 and CG4789

DIOPT Version :10

Sequence 1:NP_647644.2 Gene:RabX5 / 38209 FlyBaseID:FBgn0035255 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_573166.1 Gene:CG4789 / 32668 FlyBaseID:FBgn0030792 Length:274 Species:Drosophila melanogaster


Alignment Length:236 Identity:46/236 - (19%)
Similarity:83/236 - (35%) Gaps:78/236 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 KVIFVGDCSVGKTAIVNRFCYDKFQSNYKATIGVDFELENFSILGH----------NYSLEMWDT 120
            :::.|||..||||::.:...:::.......|:|.     |..:..|          .|.:|::|.
  Fly     8 RIVVVGDSGVGKTSLTHLITHNEALIRPGWTVGC-----NIQVKMHPFREGTARECPYFVELFDV 67

  Fly   121 AGQERFRCIAGAYYRNASVIVVTYDMSKKDSLESAKKWLNSALN--------------------- 164
            .|....:.....:|.....|::.:|::...|......||...:|                     
  Fly    68 GGSLNHKNTRSVFYAGIDGIILVHDLTNAKSQRQLIDWLYEIVNKEGKDTNKSNGASMPPSPPSP 132

  Fly   165 ----------------------YNASKRPLVFLVGTKADLLSKEEFVRM--ERLAGLAAAELQAE 205
                                  ..|::.| :.::|||.|||.::...:|  ::..|:|......|
  Fly   133 LSSFSTDNLGTDGHILFDMEEFLGATQTP-ILVMGTKLDLLDEKRHPKMGVKKPGGIADKCGAEE 196

  Fly   206 YW-----SVSARSG----FKVTELFQRI--------AALAF 229
            .|     |.|..:|    .|::..|.|:        |||||
  Fly   197 IWLNCRNSRSLAAGTTDAVKLSRFFDRVIENRKALRAALAF 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX5NP_647644.2 P-loop containing Nucleoside Triphosphate Hydrolases 66..230 CDD:476819 46/236 (19%)
CG4789NP_573166.1 P-loop containing Nucleoside Triphosphate Hydrolases 7..228 CDD:476819 41/225 (18%)

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