DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX5 and Rab9Db

DIOPT Version :10

Sequence 1:NP_647644.2 Gene:RabX5 / 38209 FlyBaseID:FBgn0035255 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_572642.1 Gene:Rab9Db / 31993 FlyBaseID:FBgn0030221 Length:197 Species:Drosophila melanogaster


Alignment Length:168 Identity:49/168 - (29%)
Similarity:87/168 - (51%) Gaps:13/168 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 PCKVIFVGDCSVGKTAIVNRFCYDKFQSNYKATIGVD-----FELENFSILGHNYSLEMWDTAGQ 123
            |.|:|.:||..||||.::.||..::|...::.|:|:|     .|..::.:   ...|::|||:..
  Fly     7 PFKIIILGDSGVGKTCLLMRFSDNQFTERHRVTVGMDRRECSVEFADWRM---GRMLQVWDTSDD 68

  Fly   124 ERFRCIAGAYYRNASVIVVTYDMSKKDSLESAKKWLNSALNYNASKRPLVFLVGTKADLLSKEEF 188
            |||:.:.....|:|..|::.||::...|.::...|:.. :......:..|.|||.|:|..:..: 
  Fly    69 ERFKLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKE-IRRLCPDKVTVLLVGNKSDDPNHRQ- 131

  Fly   189 VRMERLAGLAAAELQAE-YWSVSARSGFKVTELFQRIA 225
            |.|.:  |...|..|:. :..|||:||..|.::|..:|
  Fly   132 VSMAQ--GFNYAHRQSICFEEVSAKSGRNVYDIFSSLA 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX5NP_647644.2 P-loop containing Nucleoside Triphosphate Hydrolases 66..230 CDD:476819 48/166 (29%)
Rab9DbNP_572642.1 Rab 8..167 CDD:206640 47/165 (28%)

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