DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX5 and Rab27

DIOPT Version :10

Sequence 1:NP_647644.2 Gene:RabX5 / 38209 FlyBaseID:FBgn0035255 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_726743.1 Gene:Rab27 / 31103 FlyBaseID:FBgn0025382 Length:236 Species:Drosophila melanogaster


Alignment Length:187 Identity:60/187 - (32%)
Similarity:98/187 - (52%) Gaps:17/187 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 APRKPKFRPCKV-------IFVGDCSVGKTAIVNRFCYDKFQSNYKATIGVDFE----LENFSIL 109
            ||.:|:  |.::       :.:||..||||.::.::...:|.:.:.:|:|:||.    |.|....
  Fly     4 APPEPE--PLQLAGSGEQFLVLGDSGVGKTCLLYQYTDGRFHTQFISTVGIDFREKRLLYNSRGR 66

  Fly   110 GHNYSLEMWDTAGQERFRCIAGAYYRNASVIVVTYDM-SKKDSLESAKKWLNSALNYNASKRPLV 173
            .|...|::||||||||||.:..|:||:|...::.:|: |:|..||:| .||:....:..|:.|.|
  Fly    67 RHRIHLQIWDTAGQERFRSLTTAFYRDAMGFLLIFDLTSEKSFLETA-NWLSQLRTHAYSEDPDV 130

  Fly   174 FLVGTKADLLSKEEFVRMERLAGLAAAELQAEYWSVSARSGFKVTELFQRIAALAFE 230
            .|.|.|.||| :...|..:::|.| ....:..|...||.:|..|.|..:.:.....|
  Fly   131 VLCGNKCDLL-QLRVVSRDQVAAL-CRRYRLPYIETSACTGANVKEAVELLVGRVME 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX5NP_647644.2 P-loop containing Nucleoside Triphosphate Hydrolases 66..230 CDD:476819 55/175 (31%)
Rab27NP_726743.1 P-loop containing Nucleoside Triphosphate Hydrolases 19..187 CDD:476819 56/170 (33%)

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